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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Traes_1BL_4D9406708.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family |
MYB |
Protein Properties |
Length: 258aa MW: 29898 Da PI: 10.1331 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Traes_1BL_4D9406708.1 | genome | IWGSC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 54.5 | 2.8e-17 | 23 | 69 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g WT+eEd +lv++v+q+G + W+ a++++ R +kqc++rw+++l
Traes_1BL_4D9406708.1 23 KGQWTPEEDRKLVKLVEQFGLRKWSQMAQMLP-ARVGKQCRERWHNHL 69
799*****************************.*************97 PP
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2 | Myb_DNA-binding | 50.3 | 5.4e-16 | 75 | 117 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
++ W++eEd l++ +k+ G++ W+ Ia++++ gRt++++k++w+
Traes_1BL_4D9406708.1 75 KDTWSEEEDMVLIQTHKEVGNK-WTEIAKRLP-GRTENSIKNHWN 117
679*******************.*********.***********8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 258 aa
Download sequence Send
to blast |
MSGRFIPRRK ASSKAVKKAN VVKGQWTPEE DRKLVKLVEQ FGLRKWSQMA QMLPARVGKQ 60 CRERWHNHLR PNIKKDTWSE EEDMVLIQTH KEVGNKWTEI AKRLPGRTEN SIKNHWNATK 120 RRQFARRRTR SRAKNPKSGT LLQNYIKSLG IGSSKVIVPL DPKEPPLSAS SPATPTQNRA 180 HMNDNWPESN PSNIMLTQGI FSTDKRQIHS CEEILVPTSD DFSVDMCDGL FNAEEVQYQA 240 YNIDDDVHMD YIIYHIDY
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that binds to the motif 5'-GTAACNT-3' in the promoter of target genes (e.g. DD11 and DD18) and promotes their expression within synergid cells (e.g. in the filiform apparatus) in ovules (PubMed:16214903, PubMed:17693534, PubMed:18410484, PubMed:17937500). Required for the formation of the filiform apparatus during synergid cell differentiation in the female gametophyte (PubMed:16214903). Involved in pollen tube guidance to the micropyle (PubMed:16214903, PubMed:17937500, PubMed:23093426). {ECO:0000269|PubMed:16214903, ECO:0000269|PubMed:17693534, ECO:0000269|PubMed:17937500, ECO:0000269|PubMed:18410484, ECO:0000269|PubMed:23093426}. |