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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Traes_1AL_C7FD90C13.2 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
Family |
MYB |
Protein Properties |
Length: 302aa MW: 32920.5 Da PI: 5.6234 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Traes_1AL_C7FD90C13.2 | genome | IWGSC | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 54.2 | 3.3e-17 | 16 | 63 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g W++eEde+l++ + ++G g+W++++r g++R++k+c++rw +yl
Traes_1AL_C7FD90C13.2 16 KGLWSPEEDEKLYNHIIRHGVGCWSSVPRLAGLNRCGKSCRLRWINYL 63
678*******************************************97 PP
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2 | Myb_DNA-binding | 50 | 6.8e-16 | 69 | 112 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
rg ++++E++ +v +++ lG++ W+ Ia++++ gRt++++k++w++
Traes_1AL_C7FD90C13.2 69 RGCFSQQEEDNIVALHQILGNR-WSQIASHLP-GRTDNEIKNFWNS 112
899*******************.*********.***********96 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 302 aa
Download sequence Send
to blast |
MGRPSSGGVG QPKLRKGLWS PEEDEKLYNH IIRHGVGCWS SVPRLAGLNR CGKSCRLRWI 60 NYLRPDLKRG CFSQQEEDNI VALHQILGNR WSQIASHLPG RTDNEIKNFW NSCIKKKLRQ 120 QGIDPATHKP MGAADTATAA LPDAEDEDRK PLAAAADSSL APKQPAVFDP FPVSDYGAEF 180 ADGLGTANAA ALYGQFGCGK EGADEDAGFG AADYSCVLDV SENLGYGESS SNSSNWNYGG 240 EVGSVLDGEV PHWGKAEMEQ QHTPLEHKSS LPCQEQSLLA SFDFNLDTGQ QRTTRRPIRD 300 CT
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Functional Description ? help
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Source |
Description |
UniProt | Possible transcription activator in response to an external signal. May be involved in the regulation of flavonoid biosynthesis. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KM066946 | 0.0 | KM066946.1 Triticum aestivum R2R3-MYB transcription factor (MYB86) mRNA, complete cds. |