PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Tp7g33680 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassicaceae incertae sedis; Schrenkiella
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Family | bZIP | ||||||||
Protein Properties | Length: 271aa MW: 30403.9 Da PI: 10.847 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 21.7 | 4.4e-07 | 186 | 207 | 5 | 26 |
CHHHCHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKka 26 +r +r++kNRe+A rsR+RK++ Tp7g33680 186 RRHKRMIKNRESAARSRARKQE 207 699******************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 0.0013 | 180 | 262 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 4.8E-11 | 181 | 251 | No hit | No description |
CDD | cd14707 | 5.29E-23 | 186 | 256 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 189 | 204 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009911 | Biological Process | positive regulation of flower development | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:2000028 | Biological Process | regulation of photoperiodism, flowering | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0043621 | Molecular Function | protein self-association |
Sequence ? help Back to Top |
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Protein Sequence Length: 271 aa Download sequence Send to blast |
MLSSAKHQRN HIVSATNKNK ILNKKRSLNT MEEVWKDINL ASINHLNRHS QYPQHNHEPR 60 FRSHNHQNLN PNSIFQDFLS RPLNQEPTIP TSLTMGSSSN SDTTTVTALF SRSPLAPPAT 120 VLSLNSGAGF EFLDNQDPLV TPNSNLHSHN HLTNVSSFNT PFEALVTSTC FGKKRGQDSN 180 EGSGNRRHKR MIKNRESAAR SRARKQECAS PPLLASTQKS DVAYTNELEL EVAHLQAENA 240 RLKRQQDQLR MAAANQQPKK NTLQRSSTAP F |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor required for the transition to flowering promoted by FT. {ECO:0000269|PubMed:16099979, ECO:0000269|PubMed:16099980}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Tp7g33680 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024005340.1 | 1e-152 | protein FD | ||||
Swissprot | Q84JK2 | 1e-138 | FD_ARATH; Protein FD | ||||
TrEMBL | A0A1J3HBH2 | 1e-154 | A0A1J3HBH2_NOCCA; Protein FD (Fragment) | ||||
TrEMBL | A0A1J3J4V9 | 1e-153 | A0A1J3J4V9_NOCCA; Protein FD (Fragment) | ||||
STRING | XP_006412047.1 | 1e-154 | (Eutrema salsugineum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM1934 | 27 | 72 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35900.1 | 1e-131 | bZIP family protein |