PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Tp57577_TGAC_v2_mRNA11694
Organism
Trifolium pratense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Trifolium
Family bZIP
Protein Properties Length: 271aa    MW: 29901.5 Da    PI: 9.2309
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Tp57577_TGAC_v2_mRNA11694genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_143.19.3e-14200243548
                                CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                     bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                                +r rrk+kNRe+A rsR+RK+a+  eL +kv  Le++N++Lkke
  Tp57577_TGAC_v2_mRNA11694 200 RRLRRKIKNRESAARSRARKQAYHNELVTKVTLLEQQNTQLKKE 243
                                6889**************************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003385.2E-11196268IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.668198243IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.34E-10200248No hitNo description
PfamPF001707.0E-12200244IPR004827Basic-leucine zipper domain
CDDcd147073.61E-16200254No hitNo description
Gene3DG3DSA:1.20.5.1701.4E-11200245No hitNo description
PROSITE patternPS000360203218IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    Send to blast
MGIQTMGSQS NGQQSHLQAN QLVKQNSWYG LTLDEVDNLL GDLGKPLGSM NLDELLHNVW  60
TAEGNNVVGV ESEHVSSSSS LQRQASMTLA RALSGKTVDD VWREIQLGQK KQYGGDDVKI  120
EDREMSLGGT TLEDFLVQAG LYAGASVSST VGLDAMDTAI PQSFQPKTSL LSSSSISSLS  180
DAKPGRKRDG PDAYEKALER RLRRKIKNRE SAARSRARKQ AYHNELVTKV TLLEQQNTQL  240
KKEKEFEQRL PPEPSPEPKY RLRRISSALF *
Cis-element ? help Back to Top
SourceLink
PlantRegMapTp57577_TGAC_v2_mRNA11694
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1308030.0AC130803.61 Medicago truncatula clone mth2-10g3, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024640889.11e-162ABSCISIC ACID-INSENSITIVE 5-like protein 6
TrEMBLA0A2K3P2S80.0A0A2K3P2S8_TRIPR; Abscisic acid-insensitive 5-like protein
STRINGAET000921e-157(Medicago truncatula)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF124642532
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41070.33e-52bZIP family protein