PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Thhalv10010593m
Common NameEUTSA_v10010593mg
Organism
Eutrema salsugineum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
Family BES1
Protein Properties Length: 291aa    MW: 31244.9 Da    PI: 9.9437
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Thhalv10010593mgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF8222137.3e-66161541146
           DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspessl 94 
                      g++gr+ptwkErEnnkrRERrRRaiaaki++GLR+qGnyklpk++DnneVlkALc eAGw+v++DGttyrkgs+p+       s  ++s +ss+
  Thhalv10010593m  16 GATGRMPTWKERENNKRRERRRRAIAAKIFTGLRSQGNYKLPKHCDNNEVLKALCLEAGWIVHEDGTTYRKGSRPT-----EASPPRVSACSSI 104
                      589*************************************************************************.....5678899****** PP

           DUF822  95 qsslkssalaspvesysaspksssfpspssldsislasaasllpvlsvlslv 146
                      q+s++ssa++sp++sy+asp+sss+psp+++d ++++  a l+p+l++l+++
  Thhalv10010593m 105 QLSPQSSAFQSPIPSYQASPASSSYPSPTRFDPNQSS--AYLIPYLQNLASS 154
                      **********************************776..9******999764 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056871.4E-6018151IPR008540BES1/BZR1 plant transcription factor, N-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005773Cellular Componentvacuole
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    Send to blast
MTASGGGGES TAAGAGATGR MPTWKERENN KRRERRRRAI AAKIFTGLRS QGNYKLPKHC  60
DNNEVLKALC LEAGWIVHED GTTYRKGSRP TEASPPRVSA CSSIQLSPQS SAFQSPIPSY  120
QASPASSSYP SPTRFDPNQS SAYLIPYLQN LASSGNLAPL RISNSAPVTP PISSPRSSNP  180
RLPRWQISNF PISAPSSPTR RLHRYTSIPE CDESDVSTVD SCRWTSFQPV TVSQTCSPSP  240
TFNLVKNSVC VSGRRGGGGD VSVKPWEGEK IHDVGIDDLE LTLGNAKGRG *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A6e-2520103372452Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B6e-2520103372452Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C6e-2520103372452Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D6e-2520103372452Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapThhalv10010593m
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006404006.10.0BES1/BZR1 homolog protein 1
SwissprotQ9S7F31e-144BEH1_ARATH; BES1/BZR1 homolog protein 1
TrEMBLV4LNV80.0V4LNV8_EUTSA; Uncharacterized protein
STRINGXP_006404006.10.0(Eutrema salsugineum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM144671721
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50750.11e-119BES1/BZR1 homolog 1