PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_34985-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family G2-like
Protein Properties Length: 519aa    MW: 55590.4 Da    PI: 9.2977
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_34985-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like986.9e-31108161255
          G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                      prlrWtp+LH +F++ave+LGG+e+AtPk +l++m+v gL+++hvkSHLQ+YR+
  TRIUR3_34985-P1 108 PRLRWTPDLHMAFLHAVERLGGQERATPKLVLQMMNVRGLSIAHVKSHLQMYRS 161
                      8****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129412.56104164IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.3E-28104162IPR009057Homeodomain-like
SuperFamilySSF466892.33E-14106162IPR009057Homeodomain-like
TIGRFAMsTIGR015572.1E-22108163IPR006447Myb domain, plants
PfamPF002491.0E-8109160IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 519 aa     Download sequence    Send to blast
MGEVKEKEAL AKVLEDHRKG SSDDDSPPPA GLDLNEGFSE ASDDGEDGEE NYDDDGGSTS  60
EVAGGGRSSS NNNSANHESE SSRGHRDKAE GSGERVPTVR QYNRSKHPRL RWTPDLHMAF  120
LHAVERLGGQ ERATPKLVLQ MMNVRGLSIA HVKSHLQMYR SKKIEHESSH ERAAMSSVFS  180
PMNFHMTRGD HPFHDMFFQR AAAGSTLSSR FNDNGGVFAP RNAGLPDASR IYGLLQRRQP  240
PLQTFDFKNS TSLRNQEWAF TQHAVAARAR AVNDNGLGKG LIREMIFRKD GKPTSHLFDV  300
RDAVASNGTS SPSTSTSPAD RRSDGAKIGS INWIGSSSRP LSKAMSATGL EQGGHAQLPF  360
RWRGAAGSNG CHPNGNPGRT TSPSDPVVTR EAGSPLLLPK QGMSRAPAEE TSIGAEARRT  420
KTSATAEEKG WAPELQLSLS PNAVADTAGR GKKRNSAGQE VSSDKVPLSL SLSLHGGVVD  480
DDGGGRDGRR LDVATGSSSK KAALGLSTLD LTMSIKALE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A2e-17109163357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B2e-17109163357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C2e-17109163357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D2e-17109163357Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020172017.10.0uncharacterized protein LOC109757605
TrEMBLT1NVT80.0T1NVT8_TRIUA; Uncharacterized protein
STRINGTRIUR3_34985-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27543686
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38300.18e-33G2-like family protein