PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIUR3_30513-P1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | NAC | ||||||||
Protein Properties | Length: 385aa MW: 42787.5 Da PI: 4.2691 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 56.9 | 7.3e-18 | 10 | 120 | 10 | 128 |
NAM 10 tdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrd.kkyatgkrknratksgyWkatgkdkevlskkgelvgl 102 +deelv ++L+++ ++++l++ +v+ +d+ ++P+d + wy + d + y +g+ r++k gyWk + + ++++ g+ TRIUR3_30513-P1 10 SDEELV-RFLAERKADDSLPE-NVLVGMDLSLIHPQDSS-----PGNIWYLNQSDDqQPYGNGESDIRKAKGGYWKCIDVLRIP-T-SKSTAGV 94 69****.89999999999999.89*************85.....4577887665541457799*************99875544.4.5789*** PP NAM 103 kktLvfykgrapkgektdWvmheyrl 128 k +L fy+g+ap+g++t+W+mhey++ TRIUR3_30513-P1 95 KFSLEFYEGEAPSGKRTQWLMHEYQV 120 ************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 22.639 | 1 | 148 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 4.18E-22 | 8 | 128 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.4E-9 | 10 | 120 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 385 aa Download sequence Send to blast |
MDYSISDSWS DEELVRFLAE RKADDSLPEN VLVGMDLSLI HPQDSSPGNI WYLNQSDDQQ 60 PYGNGESDIR KAKGGYWKCI DVLRIPTSKS TAGVKFSLEF YEGEAPSGKR TQWLMHEYQV 120 EQNDEANVPQ GSKKLDTEDE LLSLSTNAPN DHLESYLQYL ADMEEQNVAV NSKIVSSSQQ 180 NSSSREGKDI YEDYNAADGV DFVNALANED YIEMKDLLSS DGSASTSEFS SRRSEEYFDS 240 DALLRELLHD QNTTREIHQD CNHNIAGPTK SDCVVISPPE QGLVHNHDNG AMVAGTSLEK 300 AASDSERDQH SSDQCLDHHP PASSCSQNSH QVILTDKYFA IFCSGERKTL RTTDPKWLDT 360 SPNPGQAGAM CTRLSCYAWP TGGET |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 2e-12 | 10 | 151 | 24 | 171 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020195723.1 | 0.0 | protein ATAF2-like | ||||
TrEMBL | M7ZMJ1 | 0.0 | M7ZMJ1_TRIUA; NAC domain-containing protein 68 | ||||
STRING | TRIUR3_30513-P1 | 0.0 | (Triticum urartu) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP10916 | 26 | 32 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G63790.1 | 3e-15 | NAC domain containing protein 102 |