PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_30513-P1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 385aa    MW: 42787.5 Da    PI: 4.2691
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_30513-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM56.97.3e-181012010128
              NAM  10 tdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrd.kkyatgkrknratksgyWkatgkdkevlskkgelvgl 102
                      +deelv ++L+++ ++++l++ +v+  +d+  ++P+d         + wy   + d + y +g+   r++k gyWk     +   + ++++ g+
  TRIUR3_30513-P1  10 SDEELV-RFLAERKADDSLPE-NVLVGMDLSLIHPQDSS-----PGNIWYLNQSDDqQPYGNGESDIRKAKGGYWKCIDVLRIP-T-SKSTAGV 94 
                      69****.89999999999999.89*************85.....4577887665541457799*************99875544.4.5789*** PP

              NAM 103 kktLvfykgrapkgektdWvmheyrl 128
                      k +L fy+g+ap+g++t+W+mhey++
  TRIUR3_30513-P1  95 KFSLEFYEGEAPSGKRTQWLMHEYQV 120
                      ************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100522.6391148IPR003441NAC domain
SuperFamilySSF1019414.18E-228128IPR003441NAC domain
PfamPF023651.4E-910120IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 385 aa     Download sequence    Send to blast
MDYSISDSWS DEELVRFLAE RKADDSLPEN VLVGMDLSLI HPQDSSPGNI WYLNQSDDQQ  60
PYGNGESDIR KAKGGYWKCI DVLRIPTSKS TAGVKFSLEF YEGEAPSGKR TQWLMHEYQV  120
EQNDEANVPQ GSKKLDTEDE LLSLSTNAPN DHLESYLQYL ADMEEQNVAV NSKIVSSSQQ  180
NSSSREGKDI YEDYNAADGV DFVNALANED YIEMKDLLSS DGSASTSEFS SRRSEEYFDS  240
DALLRELLHD QNTTREIHQD CNHNIAGPTK SDCVVISPPE QGLVHNHDNG AMVAGTSLEK  300
AASDSERDQH SSDQCLDHHP PASSCSQNSH QVILTDKYFA IFCSGERKTL RTTDPKWLDT  360
SPNPGQAGAM CTRLSCYAWP TGGET
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A2e-121015124171Stress-induced transcription factor NAC1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020195723.10.0protein ATAF2-like
TrEMBLM7ZMJ10.0M7ZMJ1_TRIUA; NAC domain-containing protein 68
STRINGTRIUR3_30513-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP109162632
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G63790.13e-15NAC domain containing protein 102