PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIUR3_27149-P1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | WRKY | ||||||||
Protein Properties | Length: 50aa MW: 5750.43 Da PI: 10.3142 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 33.2 | 1e-10 | 22 | 42 | 2 | 22 |
--SS-EEEEEEE--TT-SS-E CS WRKY 2 dDgynWrKYGqKevkgsefpr 22 Dg+ WrKYGqK+++gs++pr TRIUR3_27149-P1 22 ADGFVWRKYGQKDINGSNHPR 42 6*******************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 6.5E-10 | 12 | 42 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 9.798 | 16 | 42 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.03E-8 | 16 | 43 | IPR003657 | WRKY domain |
Pfam | PF03106 | 9.7E-8 | 23 | 42 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 50 aa Download sequence Send to blast |
MPSKRRVRGA EAHREVHADT TADGFVWRKY GQKDINGSNH PRYGQEMPLV |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | HG670306 | 8e-67 | HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020186011.1 | 4e-23 | probable WRKY transcription factor 38 | ||||
TrEMBL | A0A453FTU1 | 3e-29 | A0A453FTU1_AEGTS; Uncharacterized protein | ||||
TrEMBL | A0A453FTU4 | 5e-29 | A0A453FTU4_AEGTS; Uncharacterized protein | ||||
TrEMBL | T1N9I6 | 6e-30 | T1N9I6_TRIUA; Uncharacterized protein | ||||
STRING | TRIUR3_27149-P1 | 9e-31 | (Triticum urartu) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP8322 | 31 | 47 |