PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIUR3_23538-P1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | bZIP | ||||||||
Protein Properties | Length: 268aa MW: 29548.1 Da PI: 10.5676 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 30.1 | 1.1e-09 | 76 | 130 | 9 | 63 |
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 9 rkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 r + NR +A rs +RK +i+eLe+kv+ L++e ++L +l+ l+ + l++e+ TRIUR3_23538-P1 76 RIMANRQSAARSKERKMRYIAELERKVQCLQTEATTLSAQLSLLQRDTSGLTNEN 130 6789****************************************99988888776 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50217 | 9.668 | 70 | 133 | IPR004827 | Basic-leucine zipper domain |
SMART | SM00338 | 2.6E-12 | 71 | 132 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14703 | 3.10E-20 | 76 | 122 | No hit | No description |
SuperFamily | SSF57959 | 4.88E-10 | 76 | 123 | No hit | No description |
Pfam | PF00170 | 6.5E-8 | 76 | 129 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.5E-10 | 76 | 126 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 268 aa Download sequence Send to blast |
MSMDGSTSFG SASSGVSGRH GADAKKAISD AKLAELALVD PKRAKRDSRN IGYRIAAVDR 60 DRLHGFCFFE KESSPRIMAN RQSAARSKER KMRYIAELER KVQCLQTEAT TLSAQLSLLQ 120 RDTSGLTNEN GDLKLQVQTM EQQTEGRGSA KIATGQLNAN NGNLGNFGGL SSYGVNPQSY 180 QRSQMQQQSL LAAQQLQQLQ IHSQHQQPQM HLQQQRLASV RQQQQQQSQL RPEALPFPGD 240 LKMKGIAMTT HVQNAGPSPF DGRARSEP |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Putative transcription factor with an activatory role. |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK366888 | 1e-97 | AK366888.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2047M20. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020150534.1 | 1e-102 | transcription factor RF2a-like | ||||
Swissprot | Q04088 | 2e-45 | POF21_ARATH; Probable transcription factor PosF21 | ||||
TrEMBL | M7ZZN5 | 0.0 | M7ZZN5_TRIUA; Putative transcription factor PosF21 | ||||
STRING | TRIUR3_23538-P1 | 0.0 | (Triticum urartu) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP12302 | 29 | 37 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G06070.1 | 1e-39 | bZIP family protein |
Publications ? help Back to Top | |||
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