PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIUR3_20880-P1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | bZIP | ||||||||
Protein Properties | Length: 182aa MW: 20699.4 Da PI: 9.6303 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 34.3 | 5.1e-11 | 19 | 67 | 5 | 53 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 kr +r NR +A rs +RK +i eLe+kv+ L++e ++L+ +++ l+ TRIUR3_20880-P1 19 KRVKRVLANRQSAARSKERKMRYIVELEQKVQILQTEATTLAAQINLLQ 67 999****************************************999885 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.9E-12 | 15 | 89 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.967 | 17 | 67 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 5.5E-10 | 19 | 66 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.0E-11 | 19 | 67 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 4.6E-11 | 19 | 67 | No hit | No description |
CDD | cd14703 | 1.73E-17 | 20 | 67 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 182 aa Download sequence Send to blast |
MKKIMPDEKL AEMALADPKR VKRVLANRQS AARSKERKMR YIVELEQKVQ ILQTEATTLA 60 AQINLLQLTD GSNSMAQRDS SAVATQNNEL RFRLQAMEQQ AQLRDALNEA LTGEVQRLKI 120 ATIELGIGDS CSSNGMAQQH NLMFQQQQQQ LQQATPIPFY QLQHQQQQQQ QNGTANKHES 180 RE |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor probably involved in vascular development and shoot tissue organization. Binds to the DNA sequence 5'-CCGAGTGTGCCCCTGG-3' present in the promoter region Box II of the phloem-specific rice tungro bacilliform virus (RTBV) promoter. May regulate tissue-specific expression of the RTBV promoter and virus replication. {ECO:0000269|PubMed:14704272}. | |||||
UniProt | Transcrition factor that may participate with bZIP34 in the gametophytic control of pollen development. {ECO:0000269|PubMed:27896439}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | EU971509 | 2e-70 | EU971509.1 Zea mays clone 366380 DNA binding protein mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020177375.1 | 9e-96 | transcription factor RF2b-like | ||||
Swissprot | O22873 | 1e-43 | BZP18_ARATH; bZIP transcription factor 18 | ||||
Swissprot | Q6S4P4 | 7e-44 | RF2B_ORYSJ; Transcription factor RF2b | ||||
TrEMBL | M7Z117 | 1e-128 | M7Z117_TRIUA; Transcription factor RF2b | ||||
STRING | TRIUR3_20880-P1 | 1e-128 | (Triticum urartu) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP3536 | 35 | 76 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38900.3 | 1e-54 | bZIP family protein |