PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIUR3_14704-P1

Organism

Triticum urartu

Taxonomic ID

4572

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

G2-like

Protein Properties

Length: 339aa MW: 36820 Da PI: 6.6609

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIUR3_14704-P1	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	38.9	1.9e-12	158	183	31	56
G2-like 31 tilelmkvkgLtlehvkSHLQkYRla 56 i+elmkv+gLt+++vkSHLQkYRl+ TRIUR3_14704-P1 158 MIRELMKVDGLTNDEVKSHLQKYRLH 183 599*********************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	1.6E-11	158	186	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	1.4E-9	159	183	IPR006447	Myb domain, plants

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 339 aa Download sequence Send to blast
MAISKSSSSS SMSPDKDSSK NISLNISINT MQHSRSNLMA KTGKHNETRQ KMHLVNSSNT 60 FRAKEATTQK LQESLARLDD ERLKIDAFKR ELPLCMQLLN QAMEAYRQQL EACQMGSHGG 120 AAARAPLVLE EFIPLKNIGI DAAEKAAGNA PSEKANWMIR ELMKVDGLTN DEVKSHLQKY 180 RLHTRRPMPA PSAPPPGAPQ LVVLGGIWMP PDYAAQGAGP AGIYGAHPAT QAHYTAAVSA 240 QEYYQNAAAA AHHGHHMQHH QAASMVHHRA VAPPPPQPAY KVHPLSAAGS QASSEGRRSS 300 GGGRERSESI EEEGEEREDE EDEDEDGMAA NGDAEQINY

Functional Description ? help Back to Top
Source	Description
UniProt	Probable transcription factor that may play a role in regulatory networks controlling development and metabolism. {ECO:0000250\|UniProtKB:Q6Z869}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	HG670306	0.0	HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020184511.1	1e-65	myb family transcription factor EFM
Swissprot	Q5VRW2	4e-43	NOH1_ORYSJ; Transcription factor NIGTH1
TrEMBL	M7Z2Z2	0.0	M7Z2Z2_TRIUA; Uncharacterized protein
STRING	TRIUR3_14704-P1	0.0	(Triticum urartu)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP9773	33	38

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03500.1	6e-22	G2-like family protein

Publications ? help Back to Top
Kamrul Huda KM, et al. Salinity and drought tolerant OsACA6 enhances cold tolerance in transgenic tobacco by interacting with stress-inducible proteins. Plant Physiol. Biochem., 2014. 82: p. 229-38 [PMID:24992889]