PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_07341-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 254aa    MW: 27359.8 Da    PI: 7.5609
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_07341-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.94.8e-05136180554
                      HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
              HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      +  + + R +++ +++  L++l+ +      +K + a++L +A eYIk L
  TRIUR3_07341-P1 136 NTLMAKVRKEKLGDRITALQQLVSPF-----GKTDTASVLHEANEYIKFL 180
                      566778899999************98.....8****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.741131180IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.93E-5134185No hitNo description
SuperFamilySSF474591.26E-11134191IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.9E-8135189IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.0E-4137186IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    Send to blast
MPASMTTRPL FRAHQPAVDE AVMSNPFRDM SHSFSLLDQV PAASSPYGTA PLQGMFDNAG  60
ASRNVSVLGE CQSSTSYDGT AAMQLNQAAT QMLGGGAQLQ YLSGSGGYLP FGGAPLSSQL  120
LLQALQPKTS YSSSSNTLMA KVRKEKLGDR ITALQQLVSP FGKTDTASVL HEANEYIKFL  180
HDQVASLTYP YLKNVNPLQQ FQQKGSENAK DDGGEPKKDL RSRGLCLVPV ATTYTVASET  240
VPEFWYPTFG GTFR
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG6703060.0HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020181117.11e-162transcription factor UNE12-like isoform X2
TrEMBLA0A446NRZ50.0A0A446NRZ5_TRITD; Uncharacterized protein
TrEMBLT1LR040.0T1LR04_TRIUA; Uncharacterized protein
STRINGTRIUR3_07341-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP29703464
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20640.11e-40bHLH family protein