PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_06803-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family BES1
Protein Properties Length: 346aa    MW: 36249 Da    PI: 8.5584
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_06803-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822165.53.3e-5131103116
           DUF822   3 sgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl..eeaeaagssasaspessl 94 
                      + r ptw+ErEnn+rRERrRRa+aa i+ GLRa G+y+lpk++DnneVlkALc eAGw+ve+DGttyrkgskp   e ++ +++s s sp+ss 
  TRIUR3_06803-P1   3 ASRVPTWRERENNRRRERRRRAVAANIFHGLRARGGYALPKHCDNNEVLKALCDEAGWTVEPDGTTYRKGSKPVtaEGTNPMVRSGSPSPCSSH 96 
                      689**********************************************************************977777888999999999998 PP

           DUF822  95 qsslkssalaspvesysaspks 116
                      q s+++s  +s         +s
  TRIUR3_06803-P1  97 QVSPRASFPTS--------GTS 110
                      84444443333........222 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056871.3E-504136IPR008540BES1/BZR1 plant transcription factor, N-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    Send to blast
GMASRVPTWR ERENNRRRER RRRAVAANIF HGLRARGGYA LPKHCDNNEV LKALCDEAGW  60
TVEPDGTTYR KGSKPVTAEG TNPMVRSGSP SPCSSHQVSP RASFPTSGTS SHTTLGGGRG  120
SCYEGGSLIP WLKNLSSGSG FASSSKFPRY SPHSYYFSGG SISAPVTPPS GSPRRMPCLN  180
AGWGEYPSAQ VQPPWVGAGG SGYDDYASLP NSTPSSPRGG QGVGPDPAAW LSGFQISSAG  240
PSSPTYSLMA PSNPFRVSGE MAAATASSSR MRTPCQSGTC SPVALAVHGD VQMGARAEDD  300
FEFGSGGRPV SVNAWEGERI HEVCASDEPE LDLTLGLGSS NTRASA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A3e-21579372446Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B3e-21579372446Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C3e-21579372446Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D3e-21579372446Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtMay function in brassinosteroid signaling. {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK1012291e-64AK101229.1 Oryza sativa Japonica Group cDNA clone:J033031H19, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020165852.10.0protein BZR1 homolog 3-like, partial
SwissprotQ5Z9E51e-109BZR3_ORYSJ; Protein BZR1 homolog 3
TrEMBLT1LPJ60.0T1LPJ6_TRIUA; Uncharacterized protein
STRINGTRIUR3_06803-P10.0(Triticum urartu)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP136638112
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.14e-53BES1/BZR1 homolog 4
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]