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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
TRAES3BF080800010CFD_t1 |
Common Name | TRAES_3BF080800010CFD_c1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family |
MYB |
Protein Properties |
Length: 384aa MW: 42471 Da PI: 9.2562 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
TRAES3BF080800010CFD_t1 | genome | IWGSC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 52.2 | 1.4e-16 | 107 | 153 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+WT+eEd+ll+ +v++ G+++W+ I+++++ gR +kqc++rw ++l
TRAES3BF080800010CFD_t1 107 KGAWTQEEDKLLKILVARDGNRRWEEISKHLP-GRIGKQCRERWTNHL 153
79******************************.************996 PP
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2 | Myb_DNA-binding | 48 | 2.9e-15 | 162 | 202 | 3 | 45 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
+WT+eEd +l++ +k lG+ W++Iar++ gR+++++k++w+
TRAES3BF080800010CFD_t1 162 PWTEEEDRKLIEEHKTLGNS-WSKIARRLF-GRSENSIKNHWY 202
8*****************99.*********.***********8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 384 aa
Download sequence Send
to blast |
MASPMDMLFN QEPAAAMTNE AEGRVEGYFP SSSHGFRHFQ QVGTTPIGVP DMGSPISGFR 60 MSPFTFDMPE GPLPVAGYGT GVVPVEIPAV WQKKHSLKNS RAMAPSKGAW TQEEDKLLKI 120 LVARDGNRRW EEISKHLPGR IGKQCRERWT NHLRSDLKNE APWTEEEDRK LIEEHKTLGN 180 SWSKIARRLF GRSENSIKNH WYATKRGLTS KRRFRKRRFS LLEEYIRSTI MGDKSTASPL 240 QSSAPPLGLG SGGQVVPSAS TMLAFSSLPG MGTYLHPGNA PGSSSQGATM NLSSLLPKLN 300 TYGGEMHQRY DSSPSFPPNN MLHYGPPPTF QQMFSQCLQG QDACSNMNLF PLLKSLDLGG 360 NYYCSETGRT SIGGIDDPDD INVV
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | HG670306 | 0.0 | HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring. |