PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRAES3BF019000220CFD_t1 | ||||||||
Common Name | TAA_ctg0464b.00150.1, TRAES_3BF019000220CFD_c1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | bZIP | ||||||||
Protein Properties | Length: 250aa MW: 26792 Da PI: 8.9856 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 47.8 | 3.2e-15 | 168 | 223 | 3 | 58 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 + +r +r++kNRe+A rsR+RK+a+i+eLe v +Le+eN L ke ee ++ k TRAES3BF019000220CFD_t1 168 AMQRHKRMIKNRESAARSRERKQAYIAELESLVTQLEEENAHLSKEQEEANQRRLK 223 679*******************************************9998876544 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 3.1E-9 | 166 | 231 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 4.4E-14 | 168 | 227 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.139 | 168 | 232 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.44E-10 | 170 | 219 | No hit | No description |
CDD | cd14707 | 4.02E-17 | 170 | 216 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 3.7E-14 | 171 | 229 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 173 | 188 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence Send to blast |
MASSRVMASS SSKPPSHTAS DLARFAQAAG RPGGGGGSGL GSMNVEELLR GIYGDAPTPA 60 PDRPASPPVP PLPAPSRQQA TARRTADEVW REITGGSGGE EEAAPASAGG AGEMTLEDFL 120 AREDGAVVRG TEEQVAMPTM ALLGGAEGAR GGGRGRKRQL MDPMDRAAMQ RHKRMIKNRE 180 SAARSRERKQ AYIAELESLV TQLEEENAHL SKEQEEANQR RLKELKEKLT PVIIAKTPSQ 240 DLRRTNSMEW |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator that binds to the ABA-responsive elements (ABREs) in vitro. Involved in abiotic stress responses and abscisic acid (ABA) signaling (PubMed:20039193). Involved in the signaling pathway that induces growth inhibition in response to D-allose (PubMed:23397192). {ECO:0000269|PubMed:20039193, ECO:0000269|PubMed:23397192}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by anoxia, drought, salt stress, oxidative stress, cold and abscisic acid (ABA) (PubMed:20039193). Induced by D-allose (PubMed:23397192). {ECO:0000269|PubMed:20039193, ECO:0000269|PubMed:23397192}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | FN564430 | 0.0 | FN564430.1 Triticum aestivum chromosome 3B-specific BAC library, contig ctg0464b. | |||
GenBank | HG670306 | 0.0 | HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020174700.1 | 1e-128 | ABSCISIC ACID-INSENSITIVE 5-like protein 7 | ||||
Swissprot | Q0JHF1 | 1e-79 | BZP12_ORYSJ; bZIP transcription factor 12 | ||||
TrEMBL | A0A446Q6E7 | 1e-177 | A0A446Q6E7_TRITD; Uncharacterized protein | ||||
TrEMBL | D8L9L9 | 1e-177 | D8L9L9_WHEAT; BZIP transcription factor domain containing protein, expressed | ||||
STRING | LPERR01G33060.1 | 3e-90 | (Leersia perrieri) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP2665 | 37 | 86 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G03970.1 | 7e-28 | G-box binding factor 4 |
Publications ? help Back to Top | |||
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