PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Regulation |

Basic Information? help Back to Top

TF ID

Sphfalx0003s0214.1.p

Organism

Sphagnum fallax

Taxonomic ID

53036

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum

Family

bZIP

Protein Properties

Length: 570aa MW: 62280.7 Da PI: 4.6042

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Sphfalx0003s0214.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	33.2	1.2e-10	300	343	5	48
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 kr rr+ +NR +A+rsRqR++ ++++Le ++L eN +L + Sphfalx0003s0214.1.p 300 KRKRRMLSNRASAQRSRQRRQDRLDQLEVLTAQLRVENASLLRK 343 9*************************************998754 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	2.3E-9	296	360	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	3.6E-7	298	380	No hit	No description
PROSITE profile	PS50217	10.427	298	343	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	3.8E-9	300	343	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.29E-7	300	349	No hit	No description
PROSITE pattern	PS00036	0	303	318	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 570 aa Download sequence Send to blast
MCFPPEISVP ALPPTCVRVR DWRADERGSK RKQWRPSYVL PEEGVEIVSP SDAAPPAAPA 60 HDVRSCGGRG AQTGGNHVDA AELCAAGIKL PLQQGSVAAT NEEQQGLTTW QGQQTFPDAA 120 GAANMKEEEG AVVSGVEESA GSPPRQHTQL EIPLPNLDDK PVVPEYADSE KLQDPAELLL 180 EEGQQQGLSG PLQQQQQPLL VSGTPELEST GSFSAWFDCI AKNNDGEMEE ATSLIKERSV 240 TNASFETDTK PLKKKAPKLT KAEKSRKSAA AAAAVHSHEG TEDDMCTEDD DAEPLLIDEK 300 RKRRMLSNRA SAQRSRQRRQ DRLDQLEVLT AQLRVENASL LRKSNLALQL ARKFEHENKS 360 LLEKTQNLTM ELLGTRKMLP ATTKLHEDCQ SSPHMCADIS EIVGEADPSP EVKSNLEKVP 420 EDQKKPLKST VSESFTTVDD QIYTENTSKG THTVVHCNNE KAESCETVQV SEVGGAARKV 480 KMTSVSSPVS CKTDCKNAQV FLVPTSLPQA SMLNPVKESP LMIPVMDSQY LLEEFLEMFE 540 SDTANDPSIN NDIVMDQNWL ESFAECLNA*

Sequence ? help Back to Top

Protein Sequence Length: 570 aa Download sequence Send to blast

MCFPPEISVP ALPPTCVRVR DWRADERGSK RKQWRPSYVL PEEGVEIVSP SDAAPPAAPA  60
HDVRSCGGRG AQTGGNHVDA AELCAAGIKL PLQQGSVAAT NEEQQGLTTW QGQQTFPDAA  120
GAANMKEEEG AVVSGVEESA GSPPRQHTQL EIPLPNLDDK PVVPEYADSE KLQDPAELLL  180
EEGQQQGLSG PLQQQQQPLL VSGTPELEST GSFSAWFDCI AKNNDGEMEE ATSLIKERSV  240
TNASFETDTK PLKKKAPKLT KAEKSRKSAA AAAAVHSHEG TEDDMCTEDD DAEPLLIDEK  300
RKRRMLSNRA SAQRSRQRRQ DRLDQLEVLT AQLRVENASL LRKSNLALQL ARKFEHENKS  360
LLEKTQNLTM ELLGTRKMLP ATTKLHEDCQ SSPHMCADIS EIVGEADPSP EVKSNLEKVP  420
EDQKKPLKST VSESFTTVDD QIYTENTSKG THTVVHCNNE KAESCETVQV SEVGGAARKV  480
KMTSVSSPVS CKTDCKNAQV FLVPTSLPQA SMLNPVKESP LMIPVMDSQY LLEEFLEMFE  540
SDTANDPSIN NDIVMDQNWL ESFAECLNA*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Link Out ? help Back to Top
Phytozome	Sphfalx0003s0214.1.p