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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sopim04g049740.0.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
MYB |
Protein Properties |
Length: 109aa MW: 12615 Da PI: 11.0851 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sopim04g049740.0.1 | genome | CSHL | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 32.6 | 1.8e-10 | 11 | 48 | 1 | 39 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkq 39
+ rW e dell ++v+++G ++W++I + ++ gR+ k+
Sopim04g049740.0.1 11 KRRWNLEADELLQNLVEKHGAKNWSLIGQLIP-GRSKKS 48
579*****************************.***985 PP
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2 | Myb_DNA-binding | 23.8 | 1.1e-07 | 52 | 86 | 12 | 48 |
HHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 12 lvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+++ ++++G+ W+ Ia + gRt++ k++w ++l
Sopim04g049740.0.1 52 IIKSHAKFGNQ-WAMIAILLI-GRTDNAMKNHWSSFL 86
677899***99.*********.***********8875 PP
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that functions in salt stress response. Acts as negative regulator of NHX7/SOS1 and CBL4/SOS3 induction in response to salt stress (PubMed:23809151). In response to auxin, activates the transcription of the auxin-responsive gene IAA19. The IAA19 transcription activation by MYB73 is enhanced by direct interaction between MYB73 and PYL8 (PubMed:24894996). {ECO:0000269|PubMed:23809151, ECO:0000269|PubMed:24894996}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by salt stress. {ECO:0000269|PubMed:23809151}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | HG975516 | 7e-97 | HG975516.1 Solanum lycopersicum chromosome ch04, complete genome. |