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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sopen07g022890.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
GRAS |
Protein Properties |
Length: 414aa MW: 45918.2 Da PI: 4.8608 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sopen07g022890.1 | genome | spenn | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 367.6 | 1.7e-112 | 53 | 411 | 3 | 374 |
GRAS 3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95
lLl+cAe+v+ ++l +a lL ++ el+sp g++ +R+aayf+e L+ar+ +s + y+ l+ ++ + ++s++ ++al+ ++ +sP++kfsh
Sopen07g022890.1 53 GLLLQCAEFVAMENLDEAADLLPEIAELSSPFGSSAERVAAYFAESLSARIISSHLRFYSPLNLKSLTLTHSQKLFTALQSYNTISPLIKFSH 145
58******************************************************************************************* PP
GRAS 96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrled 188
taNqaI++a+ege++vH+iD+di+qGlQWp L+q L+sR+++ s++iTgvgs s e le+tg+rL++fA+++g+pfef+++ k +
Sopen07g022890.1 146 YTANQAIYQALEGEDHVHVIDLDIMQGLQWPGLFQILSSRSRKLRSIKITGVGS----SMELLESTGRRLTEFASSFGLPFEFQPFEGKIGHI 234
******************************************************....***************************98888899 PP
GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpresee 281
+l++L vk gE+++Vn+++ h l++ ++s + +l+ l+Pk++++veq+++h +++Fl rf+eal+yysalfd+l +l++es e
Sopen07g022890.1 235 TDLNQLGVKIGETTVVNWMH--HCLYNITGSDLG----TFRLLTLLRPKLITLVEQDLSH-GGNFLSRFVEALHYYSALFDALGDGLSEESAE 320
9******************9..566655666666....999*******************.789***************************** PP
GRAS 282 rikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
r++vE++l+g ei+n+va g +r+ + +e+W + l++ GF pv+ls + a+qa+lll +++ +gy++ ee+g+l lgWkd +L+++SaW+
Sopen07g022890.1 321 RHTVEQQLFGSEIRNIVAVGGPKRTGEVP-VERWGDELKRIGFLPVSLSGTPAAQASLLLGMFP-RGYTLVEENGCLKLGWKDLSLLTASAWQ 411
***********************887765.9*********************************.***************************6 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 414 aa
Download sequence Send
to blast |
MSSKRSISEF TPVSDEPQLL TKRPRNERGE EEEEEGEELL LVDADSIGLR LLGLLLQCAE 60 FVAMENLDEA ADLLPEIAEL SSPFGSSAER VAAYFAESLS ARIISSHLRF YSPLNLKSLT 120 LTHSQKLFTA LQSYNTISPL IKFSHYTANQ AIYQALEGED HVHVIDLDIM QGLQWPGLFQ 180 ILSSRSRKLR SIKITGVGSS MELLESTGRR LTEFASSFGL PFEFQPFEGK IGHITDLNQL 240 GVKIGETTVV NWMHHCLYNI TGSDLGTFRL LTLLRPKLIT LVEQDLSHGG NFLSRFVEAL 300 HYYSALFDAL GDGLSEESAE RHTVEQQLFG SEIRNIVAVG GPKRTGEVPV ERWGDELKRI 360 GFLPVSLSGT PAAQASLLLG MFPRGYTLVE ENGCLKLGWK DLSLLTASAW QPCD
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |