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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Solyc04g008870.2.1 |
Common Name | LOC101245350 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
MYB |
Protein Properties |
Length: 268aa MW: 29774.3 Da PI: 7.5619 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Solyc04g008870.2.1 | genome | ITAG | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 30.4 | 9e-10 | 11 | 53 | 4 | 44 |
S-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
Myb_DNA-binding 4 WTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
W+ e d + +a + ++ + +W++Ia+ ++ g+tl ++k+++
Solyc04g008870.2.1 11 WSREQDIEFENALATYPEDcvdRWEKIAADVQ-GKTLQEVKNHY 53
********************************.**********9 PP
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2 | Myb_DNA-binding | 44.6 | 3.3e-14 | 122 | 166 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
+WT++E+ l++ + +++G+g+W++I+r + +Rt+ q+ s+ qky
Solyc04g008870.2.1 122 AWTEDEHRLFLLGLEKYGKGDWRSISRNFVVTRTPTQVASHAQKY 166
7*******************************************9 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 268 aa
Download sequence Send
to blast |
MTVDKSRSSI WSREQDIEFE NALATYPEDC VDRWEKIAAD VQGKTLQEVK NHYEILLDDV 60 SRIESGYVPL PWYNSTFDRS LCNDVGGERI GKKSGVSGRL NSESNDGGKS TKLEQDRRKG 120 VAWTEDEHRL FLLGLEKYGK GDWRSISRNF VVTRTPTQVA SHAQKYFIRL NSMNKDRRRT 180 SIHDITSVNN GDVSVPRVPI TGQTIGSSGK SNKLSPTAPI APIGVGIYGA TTIGQPVTGP 240 MVNVVDQRQI QDLDIMGSSL GYYYDQP*
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed in young seedlings, developing leaves, sepals and trichomes. {ECO:0000269|PubMed:26243618}. |
Functional Description ? help
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Source |
Description |
UniProt | Transcription activator that coordinates abscisic acid (ABA) biosynthesis and signaling-related genes via binding to the specific promoter motif 5'-(A/T)AACCAT-3'. Represses ABA-mediated salt (e.g. NaCl and KCl) stress tolerance. Regulates leaf shape and promotes vegetative growth. {ECO:0000269|PubMed:26243618}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by salicylic acid (SA) and gibberellic acid (GA) (PubMed:16463103). Triggered by dehydration and salt stress (PubMed:26243618). {ECO:0000269|PubMed:16463103, ECO:0000269|PubMed:26243618}. |