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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Solyc03g116010.1.1 |
Common Name | LOC101259929 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family |
Nin-like |
Protein Properties |
Length: 312aa MW: 36029.8 Da PI: 4.6032 |
Description |
Nin-like family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Solyc03g116010.1.1 | genome | ITAG | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | RWP-RK | 78.4 | 7.9e-25 | 144 | 192 | 4 | 52 |
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52
+s + +skyF++pi+ AAkeL+++lT+LK++CR +GI+RWPhRk+ sl
Solyc03g116010.1.1 144 MLSRDAISKYFYMPITRAAKELNIGLTLLKKRCRDLGIRRWPHRKLMSL 192
588999****************************************997 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 312 aa
Download sequence Send
to blast |
MGSDQSNFEF IMTKQDNHQD LLSLPPQLPS LDDFSEFSGH YAIDYQYDLS IQENTNPLME 60 MECTLEDPFY SSFYSLTPGE LCYDEIGNEV RMLNEMSGEL IGNGHQQVLL CDNINQQEIV 120 GNEEIIVTEK EKDNIREEIN SSRMLSRDAI SKYFYMPITR AAKELNIGLT LLKKRCRDLG 180 IRRWPHRKLM SLQTLIKNVK ELEKVGGNGM EEKLKDVIKL LEKEKKKMEE IPDMELEEKT 240 KRLRQACFKA NYKRRRLLCM PELHASFGSY CSTTPSLDDN VAIGDQHEED DEEIKSLLAD 300 CFSYNSPTLH D*
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