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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sme2.5_09576.1_g00003.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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Family |
ERF |
Protein Properties |
Length: 200aa MW: 22825.5 Da PI: 6.5172 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sme2.5_09576.1_g00003.1 | genome | EGD | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 54.2 | 3.6e-17 | 38 | 87 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
y+GVr++ + +Wv+e r+p++ +kr++lg++ tae+Aa+a++ a+++l+g
Sme2.5_09576.1_g00003.1 38 IYRGVRRRN-NDKWVCEMREPTN---QKRIWLGSYPTAEMAARAHDVAALALKG 87
69****887.8*********864...5************************998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0010371 | Biological Process | regulation of gibberellin biosynthetic process |
GO:0016049 | Biological Process | cell growth |
GO:0048510 | Biological Process | regulation of timing of transition from vegetative to reproductive phase |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 200 aa
Download sequence Send
to blast |
MDNYSSNVYS DKESYLLASS NPKKRAGRKK FKETRHPIYR GVRRRNNDKW VCEMREPTNQ 60 KRIWLGSYPT AEMAARAHDV AALALKGPLA TLNFADSAWR VEVPVSKDPK VLRQAAARAA 120 EVFAIEPIDV PQLNNNNNVV AHEENSASNI YSNSCGIEEW QANMEEECLF SPNPCLFERN 180 FSWDDHVESN VEVSLWSYSI
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3'. Binding to the C-repeat/DRE element mediates cold or dehydration-inducible transcription. CBF/DREB1 factors play a key role in freezing tolerance and cold acclimation. {ECO:0000269|PubMed:11798174}. |