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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Sme2.5_08092.1_g00001.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
|
| Family |
WRKY |
| Protein Properties |
Length: 505aa MW: 55811.9 Da PI: 7.0493 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sme2.5_08092.1_g00001.1 | genome | EGD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 95.3 | 4.2e-30 | 228 | 287 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
++Dg++WrKYGqK kg+++pr+YYrCt a +Cpv+k+v+r+ +d +++++tYeg+Hnh+
Sme2.5_08092.1_g00001.1 228 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApSCPVRKQVQRCIQDMSILITTYEGTHNHP 287
58***************************99****************************7 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 505 aa
Download sequence Send
to blast |
MDAVFRKSIR GGVVLKEDTK IKADHEEDDI NCLKVGKGRK SVHHEDDNSK SSQQKDLEED 60
DQLESAKADM EVVKEENQRL KKHLDRIMKD YRNLQMQFQE VAQKTNGVKH DEAELVSLSL 120
GRTSSDTKKE LYKLILSKNE NEEEEDNLAL GLDCNFQWHA ITPSKSSPSN LSPENSSGEV 180
KDDEKGAETW PPQKVLKTMR NEEDDVAQQN PTKRAKVSVR VRCDTPTMND GCQWRKYGQK 240
IAKGNPCPRA YYRCTVAPSC PVRKQVQRCI QDMSILITTY EGTHNHPLPQ SATSMAFTTS 300
AAASMLLSGS SSSGSGPTST TGSATSTALN HYLSYNSKPN PFYLPNSSIS SSSHSQYPTI 360
TLDLTSGSSI SSLPVHNHRM SSNYPPRYNN SSTNILNFSS YDSNMSWSNG NFNQASQSYL 420
QSNIISAMQP TQTNLSPQDT ITAATKAIAS DPKFQSALAV ALTSIIGSRG ANHHIDEKSE 480
QNLKVNQPFP VLCSLPSTSH GDYKD
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription activator involved in the transcriptional regulation of terpene biosynthesis in glandular trichomes (PubMed:24884371). Binds to the promoter of the linalool synthase TPS5 and promotes TPS5 gene transactivation (PubMed:24884371). In association with WRKY72B, contributes to basal defense against root-knot nematodes (RKNs) and potato aphids, as well as Mi-1-mediated gene-for-gene resistance to these pests (PubMed:20409007). Both WRKY72A and WRKY72B are not required for gene-for-gene resistance mediated by Pto, another tomato R gene (PubMed:20409007). {ECO:0000269|PubMed:20409007, ECO:0000269|PubMed:24884371}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by infection with the root-knot nematode (RKN) Meloidogyne incognita and potato aphids. {ECO:0000269|PubMed:20409007}. |
