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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sme2.5_06719.1_g00002.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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Family |
CAMTA |
Protein Properties |
Length: 316aa MW: 35836.2 Da PI: 5.6927 |
Description |
CAMTA family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sme2.5_06719.1_g00002.1 | genome | EGD | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | CG-1 | 142 | 1.7e-44 | 5 | 87 | 36 | 118 |
CG-1 36 sgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcywlLeeelekivlvhylevk 118
gsl+L++rk++ryfrkDG+sw+kk+dgktv+E+he+LK g+++vl+cyYah+een++fqrr+yw+Leee+++ivlvhy+evk
Sme2.5_06719.1_g00002.1 5 GGSLFLFDRKVLRYFRKDGHSWRKKRDGKTVKEAHERLKAGSIDVLHCYYAHGEENENFQRRSYWMLEEEMSHIVLVHYREVK 87
69******************************************************************************986 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 316 aa
Download sequence Send
to blast |
MVLPGGSLFL FDRKVLRYFR KDGHSWRKKR DGKTVKEAHE RLKAGSIDVL HCYYAHGEEN 60 ENFQRRSYWM LEEEMSHIVL VHYREVKGNR TNFSRIREPQ QVTPDLQETE EDVHSSEVDS 120 SASTKFYPND YQVNSQVTET TSLSSAQASE YEDAESVYNQ HPTSGFHSFL DAQPSAGDGL 180 AVPYHPIPFS NDQVQFAGSS GLTFSSIPPG NENRNTANTY MPSRNLDFPS WEAISIDNPV 240 AYQSLHFQPS GQSGANNLMH EQGNTAMGQM FLNDFKRQEH ENHIDGLGNW QPSRLGAKTD 300 DSKPFILRQQ AEPTPS
|
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | GU170838 | 0.0 | GU170838.1 Solanum lycopersicum cultivar Rutgers calmodulin-binding protein mRNA, complete cds. |