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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sme2.5_04796.1_g00003.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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Family |
GRAS |
Protein Properties |
Length: 430aa MW: 47767.4 Da PI: 5.0928 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sme2.5_04796.1_g00003.1 | genome | EGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 370.1 | 3e-113 | 69 | 427 | 3 | 374 |
GRAS 3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevs 88
lLl+cAe+v+ ++l +a +lL ++ el+sp g++ +R+aayf+eAL+ar+ +s + y+ ++ ++ + ++s++ ++al+ ++ +s
Sme2.5_04796.1_g00003.1 69 GLLLQCAECVAMENLDEAAHLLPEIAELSSPFGSSAERVAAYFAEALSARIISSHLRFYSPFHLKALTLTHSQKLFTALQSYNTIS 154
58************************************************************************************ PP
GRAS 89 PilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgv 174
P++kfsh taNqaI++a+e e++vHiiD+di+qGlQWp L+q L+sR+++ s++iTgvgs s e le+tg+rL++fA+++g+
Sme2.5_04796.1_g00003.1 155 PLIKFSHYTANQAIYQALEDEDHVHIIDLDIMQGLQWPGLFQILSSRSRKLCSIKITGVGS----SMELLESTGRRLTEFANSFGL 236
*************************************************************....********************* PP
GRAS 175 pfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflea 260
pfef++l k + e+++L vk gE+ +Vn+++ h l+d ++s +L+l+ l+Pk++++veq+++ +++Fl rf+ea
Sme2.5_04796.1_g00003.1 237 PFEFQPLEGKIGHITEVDQLGVKIGETRVVNWMH--HCLYDITGSDMG----TLRLLSLLRPKLITMVEQDLSQ-GGKFLGRFVEA 315
******988899999******************9..777766777777....********************98.789******** PP
GRAS 261 leyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvks 346
l+yysalfd+l +l++es er++vE++l+g ei+n+va g +r+ + + +W + l++ GF pv+ls +aa+qa+lll +++
Sme2.5_04796.1_g00003.1 316 LHYYSALFDALGDGLSEESAERHTVEQQLFGSEIRNIVAVGGPKRTGEVP-VDRWGDELKRIGFFPVSLSGTAAAQASLLLGMFP- 399
********************************************887765.9*********************************. PP
GRAS 347 dgyrveeesgslvlgWkdrpLvsvSaWr 374
+gy++ ee+g+l lgWkd L+++SaW+
Sme2.5_04796.1_g00003.1 400 RGYTLVEENGCLKLGWKDLCLLTASAWQ 427
***************************6 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 430 aa
Download sequence Send
to blast |
MQQFSFVSAT PINHTSSSMS SKRSIVEFTP ASDEDPLLTK RPRNEREEEE EEEAVVLVDA 60 DSIGLRLLGL LLQCAECVAM ENLDEAAHLL PEIAELSSPF GSSAERVAAY FAEALSARII 120 SSHLRFYSPF HLKALTLTHS QKLFTALQSY NTISPLIKFS HYTANQAIYQ ALEDEDHVHI 180 IDLDIMQGLQ WPGLFQILSS RSRKLCSIKI TGVGSSMELL ESTGRRLTEF ANSFGLPFEF 240 QPLEGKIGHI TEVDQLGVKI GETRVVNWMH HCLYDITGSD MGTLRLLSLL RPKLITMVEQ 300 DLSQGGKFLG RFVEALHYYS ALFDALGDGL SEESAERHTV EQQLFGSEIR NIVAVGGPKR 360 TGEVPVDRWG DELKRIGFFP VSLSGTAAAQ ASLLLGMFPR GYTLVEENGC LKLGWKDLCL 420 LTASAWQPYH
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |