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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sme2.5_03732.1_g00002.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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Family |
ERF |
Protein Properties |
Length: 255aa MW: 28248.3 Da PI: 7.9284 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sme2.5_03732.1_g00002.1 | genome | EGD | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 64.7 | 1.9e-20 | 140 | 189 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
y+GVr+++ +g+W+AeIrdp+ + +r++lg+f taeeAa+a+++a+ +++g
Sme2.5_03732.1_g00002.1 140 NYRGVRQRP-WGKWAAEIRDPR----KaARVWLGTFSTAEEAARAYDRAAIEFRG 189
59*******.**********94....36************************998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0001944 | Biological Process | vasculature development |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0010200 | Biological Process | response to chitin |
GO:0050832 | Biological Process | defense response to fungus |
GO:0051301 | Biological Process | cell division |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 255 aa
Download sequence Send
to blast |
MHKSNKRFKQ EGTSNEFQHQ PRLTGDQEYS VMVATLENVI SGNIPSQEFN SFSPFQYSTV 60 TTTTTITSSS SPSTSFEQVL GVPAEQEPCQ FCRIQGCLGC DIFETTFSSS AAPVVAAPVA 120 DNKKKSSATT TTIAKKKKKN YRGVRQRPWG KWAAEIRDPR KAARVWLGTF STAEEAARAY 180 DRAAIEFRGP RAKLNFSFAD YTVDTPEQQS ISSSSPQQLS EEPKQLQQGN NNSDFGNEIW 240 DQLMGDSIIN PSFAT
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 122 | 138 | KKKSSATTTTIAKKKKK |
2 | 133 | 139 | AKKKKKN |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | HG975440 | 1e-169 | HG975440.1 Solanum pennellii chromosome ch01, complete genome. |