 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Sme2.5_03503.1_g00002.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
|
| Family |
CPP |
| Protein Properties |
Length: 206aa MW: 22705.1 Da PI: 8.488 |
| Description |
CPP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sme2.5_03503.1_g00002.1 | genome | EGD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | TCR | 53.1 | 6.3e-17 | 13 | 52 | 1 | 40 |
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40
k++kgC+Ckks ClkkYCeCf+a+ Cse+CkC dCkN e
Sme2.5_03503.1_g00002.1 13 KHNKGCHCKKSGCLKKYCECFQANILCSENCKCIDCKNFE 52
589***********************************65 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 206 aa
Download sequence Send
to blast |
MQEEAEDGLV LPKHNKGCHC KKSGCLKKYC ECFQANILCS ENCKCIDCKN FEGSEERRAL 60
LHGDHANNIA YLQQAANAAI TGAIGSSGYG SPPVNKKRKP QELFSGSMII DPVHRLGQFQ 120
QENQIKASVP WSLSSIPGTH VGNAAALCPS KFTYRSLLAD VIQPHDIKEL CSVLVVYARE 180
AAKILTDQWE AFKVLLSPFS RLKKKT
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Plays a role in development of both male and female reproductive tissues. {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | BT013447 | 0.0 | BT013447.1 Lycopersicon esculentum clone 132102R, mRNA sequence. |
| Best hit in Arabidopsis thaliana ? help
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| Hit ID |
E-value |
Description |
| AT4G29000.1 | 6e-77 | Tesmin/TSO1-like CXC domain-containing protein |
