 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Sme2.5_03023.1_g00004.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
|
| Family |
WRKY |
| Protein Properties |
Length: 191aa MW: 21013.3 Da PI: 3.8652 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sme2.5_03023.1_g00004.1 | genome | EGD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 25.5 | 2.6e-08 | 38 | 64 | 33 | 59 |
--EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 33 pvkkkversaedpkvveitYegeHnhe 59
p kk+ver+++d ++++itY+++Hnh+
Sme2.5_03023.1_g00004.1 38 PLKKQVERCSKDASLFIITYTSSHNHP 64
679***********************7 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 191 aa
Download sequence Send
to blast |
MKGLLQIVGL GENMDRNPLK DPLIPGVITD AAVQRVAPLK KQVERCSKDA SLFIITYTSS 60
HNHPDPNLPN NVTQEPIVDQ HVSLKDNDDD DDDDNDDPQS CKSPLSSTAT TTSSSISQGI 120
LEENLLTDNF LGTISCDDFL PLSYPQLMKF PKSELSEEND FYDELGELEL PPSSTPFAGI 180
FEEAILVDPY S
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | HG975440 | 1e-175 | HG975440.1 Solanum pennellii chromosome ch01, complete genome. |
