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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Sme2.5_02826.1_g00003.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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Family |
ERF |
Protein Properties |
Length: 216aa MW: 24569.8 Da PI: 5.0302 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sme2.5_02826.1_g00003.1 | genome | EGD | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 51.8 | 2e-16 | 53 | 102 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
y+GVr++ +Wv+eIr+p +k+ r++lg++ t+e Aa+a++ a+++l+g
Sme2.5_02826.1_g00003.1 53 LYRGVRRRN-GDKWVCEIREP---NKKSRIWLGTYSTPEIAARAHDVAALALRG 102
69****877.9*********9...347*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 216 aa
Download sequence Send
to blast |
MDFEDDSSSS SDHEILDNKE KIIDISSCSM DINNVQFKRR AGRKKFKETR HPLYRGVRRR 60 NGDKWVCEIR EPNKKSRIWL GTYSTPEIAA RAHDVAALAL RGSNALLNFP DSAWSLPKAK 120 SSSPCDIQIA VLQVTKELIV SSPPSSEEPS CYNNSQKPKD DQVNSLVEFM DEEAMFNMPI 180 LIDSMAEGML LTPPAMKKGF HWDDVEEDVE FTLWKD
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3D Structure ? help Back to Top |
 |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1gcc_A | 1e-14 | 54 | 110 | 3 | 60 | ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1 |
5wx9_A | 1e-14 | 51 | 110 | 12 | 72 | Ethylene-responsive transcription factor ERF096 |
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