 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Sme2.5_02752.1_g00007.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
|
| Family |
WRKY |
| Protein Properties |
Length: 296aa MW: 33905.4 Da PI: 6.3125 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sme2.5_02752.1_g00007.1 | genome | EGD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 86.7 | 2.1e-27 | 113 | 173 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59
dDgy+WrKYGqK++ g+ +pr+YYrCt++ gC ++k+v++s+edp v+e+tY+g H ++
Sme2.5_02752.1_g00007.1 113 DDGYSWRKYGQKDILGAIHPRAYYRCTHRdtqGCLATKQVQKSKEDPLVFEVTYKGMHSCK 173
8***************************99999*************************997 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 296 aa
Download sequence Send
to blast |
MEKVKAWDKE TLIAELTQGK EFVNRLKNQF DPLASPEECD LLLEKILSSL DKSLSILNWK 60
GFNETKDPLS SCPSIVDLGY LRDQGQNKKR KKMQQWSKQV RICGTGVDSF NHDDGYSWRK 120
YGQKDILGAI HPRAYYRCTH RDTQGCLATK QVQKSKEDPL VFEVTYKGMH SCKTSQPSIF 180
ISYENQKPNQ CQIKKQKVEK LNTIKEETGP FTPPVCQSQN TQFFANSIEP STSESMYLSL 240
FPTHEEEFEI GKLLHLSSTP TSVIDLPFYA HSDLSMDGQL GIHDPDLMID ISEYFE
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | HG975449 | 1e-128 | HG975449.1 Solanum pennellii chromosome ch10, complete genome. |
