 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Sme2.5_00378.1_g00006.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
|
| Family |
WRKY |
| Protein Properties |
Length: 79aa MW: 9202.87 Da PI: 10.7157 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sme2.5_00378.1_g00006.1 | genome | EGD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 29.5 | 1.5e-09 | 25 | 46 | 1 | 22 |
---SS-EEEEEEE--TT-SS-E CS
WRKY 1 ldDgynWrKYGqKevkgsefpr 22
ldDgy+WrKYG+K+vk +++ r
Sme2.5_00378.1_g00006.1 25 LDDGYKWRKYGKKKVKTNTNLR 46
59***************99876 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | CU468256 | 4e-48 | CU468256.3 S.lycopersicum DNA sequence from clone LE_HBa-66O12 on chromosome 4, complete sequence. |
| GenBank | HG975516 | 4e-48 | HG975516.1 Solanum lycopersicum chromosome ch04, complete genome. |
