 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Sme2.5_00250.1_g00013.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
|
| Family |
ERF |
| Protein Properties |
Length: 239aa MW: 27061.9 Da PI: 4.5649 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sme2.5_00250.1_g00013.1 | genome | EGD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 59.6 | 7.4e-19 | 53 | 103 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
y+GVr++ +++Wv+e+r+pse +kr++lg++ t+e+Aa+a++ a+++l+g+
Sme2.5_00250.1_g00013.1 53 IYRGVRRRN-NNKWVCEVREPSE---QKRIWLGTYPTPEMAARAHDVAALALRGN 103
69****887.8*********976...5*************************995 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 239 aa
Download sequence Send
to blast |
MTSNTTNLER DHNLQETSSS SGGAQDEGAF QLASSRPKKC AGRKKFKETR HPIYRGVRRR 60
NNNKWVCEVR EPSEQKRIWL GTYPTPEMAA RAHDVAALAL RGNLATLNFA DSSWRLEVPT 120
SKDPEELRQA AMKAAEAFRQ DTELVGVDYM NEEMKSQEDI VVGGANGNDN NIQNMEMENI 180
LCCNNWGENN EMLEIEGSSS WQEKMAEGHL FSPTPCLDSC FSWDDVESDV EVTLWNYNM
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | HG975447 | 2e-65 | HG975447.1 Solanum pennellii chromosome ch08, complete genome. |
| GenBank | HG975520 | 2e-65 | HG975520.1 Solanum lycopersicum chromosome ch08, complete genome. |
