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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Sme2.5_00250.1_g00012.1 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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| Family |
ERF |
| Protein Properties |
Length: 323aa MW: 36079.6 Da PI: 5.9932 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sme2.5_00250.1_g00012.1 | genome | EGD | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 59 | 1.1e-18 | 49 | 100 | 1 | 56 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
+ y+GVr++ +++Wv+e+r+ps+ +kr++lg++ t+e+Aa+a++ a+++l+g+
Sme2.5_00250.1_g00012.1 49 PVYRGVRRRN-NNKWVCELREPSQ---QKRIWLGTYPTPEMAARAHDVAALALRGN 100
68*****887.8*********954...5*************************995 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 323 aa
Download sequence Send
to blast |
MNNHLSSYSA HLNPLSATTP SDEEGILLLA SSRPKKRAGR KKFKETRHPV YRGVRRRNNN 60
KWVCELREPS QQKRIWLGTY PTPEMAARAH DVAALALRGN LATLNFADSR WRSPVPASKD 120
PKDIRQAAVT AAQTYSQDHE LVGVDYMNEE AYSSTIEEVK YQEIDIARDD NGSSSDFGAK 180
ELNIDMANVL CCKWGEENEM SEMEGWRKKM AEGLLFSPTP RLGSCFSWDD VESDVEAKDT 240
TIDFMAFLDA FFRFPIQIFS PKTPYCHSGT DVDISTADVG IGFPVEATAL VNSQSFSSLA 300
AIGNLQVLYL GCLLGRACYR LGR
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