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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Sme2.5_00248.1_g00015.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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Family |
AP2 |
Protein Properties |
Length: 291aa MW: 32863.1 Da PI: 5.4544 |
Description |
AP2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sme2.5_00248.1_g00015.1 | genome | EGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 44.9 | 3e-14 | 19 | 66 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
+y+GVr +k++ r+ AeIr p ++++lg+f+t+e Aa ++ a++k++g+
Sme2.5_00248.1_g00015.1 19 RYRGVR-KKSSSRYGAEIRNP------TYVWLGTFDTPELAASVYDMAARKYHGP 66
69***9.5669*********9......**************************95 PP
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2 | AP2 | 21.7 | 5.1e-07 | 188 | 218 | 26 | 52 |
AP2 26 g.kr.krf..slgkfgtaeeAakaaiaarkk 52
g ++ +rf +lg+f+taeeAa+a++ a+++
Sme2.5_00248.1_g00015.1 188 GnRCeRRFvwRLGNFDTAEEAARAYDTAARR 218
45444443338*****************987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 291 aa
Download sequence Send
to blast |
MTKKKNGNVV AIAPPNEVRY RGVRKKSSSR YGAEIRNPTY VWLGTFDTPE LAASVYDMAA 60 RKYHGPITKT NFPPTNEDNL ENINPMDASD INNPNQSSDF GSFFESRDEL VIIQQNPFLN 120 HFSVFNSDDS APSQTTLEEY YSEILRRDGV ISCDPKPANY IQKEMTRDFI DGNDNRRGSS 180 NGSGSNNGNR CERRFVWRLG NFDTAEEAAR AYDTAARRNV ISINNNNDIG SFSRSGDGTV 240 RIPMPNENPD HEFFRLQQSP EKNCYFLTQR SFHNSSEPLN LELSLAPTGS M
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