 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Sme2.5_00232.1_g00015.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
|
| Family |
WRKY |
| Protein Properties |
Length: 285aa MW: 30867.5 Da PI: 5.894 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sme2.5_00232.1_g00015.1 | genome | EGD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 37 | 7e-12 | 198 | 254 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
D+++W+KY + s+f+ YY C +Cp+k+ v++s +dp+ ++t +g+Hnh+
Sme2.5_00232.1_g00015.1 198 ADQWRWKKYEI--GHYSTFTGIYYTCGEVeNCPAKRLVQKSIRDPNKGIVTCRGQHNHP 254
59*******53..46799********9988****************************8 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 285 aa
Download sequence Send
to blast |
MVISMLVIPR FFGNGDINVN NTSVLGNGDI NVNNTSVHGN GDINVNNTSV HGNGDINVNN 60
TSVHGNGDIN VNNTSGHGNG DINVNTSVLG DQTVHEDPTQ GTSVNGDINV DNTSVLDNHS 120
VHEDPTHGNS VNGDINVNNT SVLDNHSVHE DPTHGNSVNT TQDTAHFPEE SHSVGTRIPI 180
QELNPATKKT KREIVAEADQ WRWKKYEIGH YSTFTGIYYT CGEVENCPAK RLVQKSIRDP 240
NKGIVTCRGQ HNHPPLNQHI AMVQRRPNAA VPMEDPSFPS STSTL
|
