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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sme2.5_00228.1_g00005.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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Family |
GRF |
Protein Properties |
Length: 376aa MW: 41467.8 Da PI: 9.0166 |
Description |
GRF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sme2.5_00228.1_g00005.1 | genome | EGD | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRC | 81 | 1.1e-25 | 149 | 192 | 1 | 44 |
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44
d+epgrCrRtDGKkWRCsr+v++g+k+CErH+hrgrsrsrk++e
Sme2.5_00228.1_g00005.1 149 DPEPGRCRRTDGKKWRCSRDVVAGQKYCERHVHRGRSRSRKPVE 192
79***************************************987 PP
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2 | QLQ | 43 | 1.3e-15 | 78 | 112 | 2 | 36 |
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36
+F+ +Q+q+L+ Q l++++++a++PvP+eLl ++
Sme2.5_00228.1_g00005.1 78 YFSLDQWQELELQSLIFRHFIAGAPVPSELLHLVK 112
7*****************************98776 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 376 aa
Download sequence Send
to blast |
MDFNLKQWRN EHESENQESP TKLPRLVLDF HSLSSSVPTD SPALPLFVSE PTTTSTKLMS 60 DSTTTATTKF SRMGSGGYFS LDQWQELELQ SLIFRHFIAG APVPSELLHL VKKSIISSPP 120 PPPSYYYSHP FQQYPHYQQA WYWGRAAMDP EPGRCRRTDG KKWRCSRDVV AGQKYCERHV 180 HRGRSRSRKP VEIPTPANNG SRNKDNNNTL SHHQAFGKMA GHAAAPHFSL SGHSPSTNAP 240 FHIDQRSSES TKKGPPLEAQ KDVSGGQILR HFFDDWPRQQ LQEGDNAATS LSISMPGGGG 300 NPSSDFSLKL STGNDYDSGT QVSNIDRTTW GTSHQVASMG GPLAEALRSS TTNSSPTSVL 360 HQLARGSTSE ASYIST
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT013977 | 0.0 | BT013977.1 Lycopersicon esculentum clone 133022R, mRNA sequence. |