PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sme2.5_00003.1_g00022.1
Organism
Solanum melongena
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
Family bZIP
Protein Properties Length: 581aa    MW: 62777.8 Da    PI: 9.6199
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sme2.5_00003.1_g00022.1genomeEGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.92.8e-10304355556
                              CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                   bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 
                              kr++r   NR++A rs +RK  +i eLe kv++L++e ++L  ++  l+k+ 
  Sme2.5_00003.1_g00022.1 304 KRAKRILANRLSAARSKERKTRYISELEHKVQKLQTETTTLSTQVTILQKNF 355
                              9*****************************************9998888865 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.6E-14300364IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.875302365IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1706.9E-11304356No hitNo description
SuperFamilySSF579591.52E-11304358No hitNo description
PfamPF001702.0E-9304355IPR004827Basic-leucine zipper domain
CDDcd147033.63E-20305354No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 581 aa     Download sequence    Send to blast
MAQSNSKPPM SGHNFGVEAA SHVRSLSQSS IFSNSCLPPL SPFPPSEPSM VSAHSSLKDT  60
SMEEVGVNSQ GPRVVSSFTR DGLPPRKGHR RSNSDVPLGF SAMIQSSPQL MPISGQKVLG  120
RAMSLGDSNG KIDVEGIGER KLKGEVTDEL LFSYMNLENV EALNSKGTED RDKGCIVSRT  180
KVSSCDSSNN EAESGLKGNT VSVQPTSLRE GIKRSADANI APVARHFRSL SMDSAIESFH  240
YGGESPNLPT SLVIRPGQLS PSNSGNESSS KHNLDFGNAD FSEAEMKKIM ADERLAEIAV  300
SDPKRAKRIL ANRLSAARSK ERKTRYISEL EHKVQKLQTE TTTLSTQVTI LQKNFVEISS  360
LNSELKFRIQ AMEQQAQLRD GPNVTGLESG AAQSARAASQ GHSTPRTSFT LVRNPTGFAL  420
PWARQESGNS SRPVVPFERL GPLHSQSTTT SASAIENTLT SILPNAVSLT VKEVRCSRRT  480
CLCSPLALKF LSETAHFIVF PTSACTISVL VQPLHESLTA EVQRLKLAAG ELREEGQLPN  540
KMTQQLPVKH NMSQMQRQQP SQMQQLSVGK TSVASATPAS A
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0128330.0BT012833.1 Lycopersicon esculentum clone 113887F, mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006342019.10.0PREDICTED: probable transcription factor PosF21 isoform X2
RefseqXP_015161902.10.0PREDICTED: probable transcription factor PosF21 isoform X1
TrEMBLM0ZWF90.0M0ZWF9_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000095380.0(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12652478
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G21230.25e-61bZIP family protein