PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Sevir.7G170100.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family | NAC | ||||||||
Protein Properties | Length: 355aa MW: 39311.2 Da PI: 9.169 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 23.5 | 1.5e-07 | 56 | 170 | 7 | 126 |
NAM 7 FhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpk.kvkaeek.ewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 F+P ++lv +yL ++ + + +l i+++d+y + +P L k + a+++ ew fF++r + nr ++ g + + k+ Sevir.7G170100.1.p 56 FDPAPDDLVGRYLPARRALRCGDLPPQIHDADVYGAhHPALLAKvHPPANDRpEWLFFVCRGRGLG----GNRRARPGAYRLASEAKPRG- 141 9************99988777777667******97638999973233334446*******998654....45545567777776655544. PP NAM 95 kkgelvglkktLvfy..kgrapkgektdWvmhey 126 + +++ ++ + +a+ +++t+W m+ey Sevir.7G170100.1.p 142 -----AWYCHSFRYHedSVEASAARETEWRMDEY 170 .....588899****4445889999********9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 12.035 | 50 | 189 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 3.66E-14 | 55 | 187 | IPR003441 | NAC domain |
Pfam | PF02365 | 7.9E-6 | 56 | 170 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 9.028 | 206 | 354 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 4.71E-14 | 217 | 338 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 355 aa Download sequence Send to blast |
MQKAASCPAP SAAGLREEET DDGWQRHGGR AGAGGRPPRP PRRGGNRPPG GQPPPFDPAP 60 DDLVGRYLPA RRALRCGDLP PQIHDADVYG AHHPALLAKV HPPANDRPEW LFFVCRGRGL 120 GGNRRARPGA YRLASEAKPR GAWYCHSFRY HEDSVEASAA RETEWRMDEY GDRGAGGAFD 180 VVVCKLYPAR GGALHKRLLL RLDGAGPREG ADDVRPQVLV QLYLASLGVG DPLRCRMHHA 240 ADVCAAHPAV LTSVLPAAND RFEWFFVARR PRAEHGDDGN GIARPRRAVP GQYVPAARYW 300 SVKDGEGREL GYRRLFRYRE DEEVHGDDEE LVVYKVYLRM DGSRTLDSCW RGRR* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Sevir.7G170100.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025825360.1 | 1e-158 | uncharacterized protein LOC112900773 | ||||
TrEMBL | K3YBS1 | 0.0 | K3YBS1_SETIT; Uncharacterized protein | ||||
STRING | Si011665m | 0.0 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP14767 | 18 | 19 |
Link Out ? help Back to Top | |
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Phytozome | Sevir.7G170100.1.p |