PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Sevir.7G160300.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family | bZIP | ||||||||
Protein Properties | Length: 380aa MW: 40211.8 Da PI: 6.3227 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 34.2 | 5.4e-11 | 177 | 235 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr++r NR +A rs +RK +i+eLe+kv++L++e ++L +l +l+ + l+se+ Sevir.7G160300.1.p 177 KRAKRILANRQSAARSKERKMRYIAELERKVQTLQSEATTLSAQLAMLQRDTSGLTSEN 235 9************************************************9999999987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.2E-17 | 173 | 237 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.208 | 175 | 238 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 5.91E-11 | 177 | 231 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 3.1E-11 | 177 | 232 | No hit | No description |
Pfam | PF00170 | 3.7E-9 | 177 | 235 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14703 | 2.48E-25 | 178 | 227 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 380 aa Download sequence Send to blast |
MDPAPPVDPA ASCSASTSAS AAAPGDVAAM LPDSPPRRGA GHRRAQSEIL LGGAALPDDL 60 TFDADLGVVG EACGAGDEDE EDYDEDEEAG GGAGGSRMFE MFLENGGTLP GTPVPSAHPH 120 PAATPPPRPR HQHSMSMDGS TSLLGSASAG TPGRAGADAK KAISDAKLAE LALVDPKRAK 180 RILANRQSAA RSKERKMRYI AELERKVQTL QSEATTLSAQ LAMLQRDTSG LTSENSDLKI 240 RVQTMEQQVR LQDALNDRLR DEIQQLKIAT GQVNANIGKM GSFGLSTFGG NPQSFQRSHI 300 QSLLAAQQLQ QLQIHSQHQQ QQTHLQKQQQ QQHLSTAQQH QLLQEALPFP GDLKMKGLAL 360 PSHAPNAGAS DNHAVKSEP* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Putative transcription factor with an activatory role. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Sevir.7G160300.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004976085.1 | 0.0 | transcription factor RF2a-like | ||||
Swissprot | Q04088 | 2e-90 | POF21_ARATH; Probable transcription factor PosF21 | ||||
TrEMBL | A0A368RW53 | 0.0 | A0A368RW53_SETIT; Uncharacterized protein | ||||
STRING | GRMZM2G112483_P01 | 0.0 | (Zea mays) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP12302 | 29 | 37 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G06070.1 | 2e-60 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Sevir.7G160300.1.p |
Publications ? help Back to Top | |||
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