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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Sevir.1G007200.5.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family |
MYB |
Protein Properties |
Length: 335aa MW: 36878.6 Da PI: 7.0277 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sevir.1G007200.5.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 54.6 | 2.6e-17 | 32 | 78 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg+W++eE e+l++ v + +++W++Iar ++ gR++kqc++rw yl
Sevir.1G007200.5.p 32 RGAWSQEENEILIQMVDAHSSKDWSSIARAVP-GRSRKQCRDRWTHYL 78
89******************************.***********9886 PP
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2 | Myb_DNA-binding | 40.7 | 5.6e-13 | 85 | 125 | 2 | 44 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS
Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44
++W+++E+ l++a+k +G++ W a+ ++ gRt+k +k++w
Sevir.1G007200.5.p 85 MPWSEQEEIDLIRAHKIHGNK-WCELAKFFP-GRTGKAIKNYW 125
68*******************.*********.*********** PP
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Sequence ? help Back to Top |
Protein Sequence Length: 335 aa
Download sequence Send
to blast |
MNSYCSMMSP YKLLNISTMK NRKGQTVSFK RRGAWSQEEN EILIQMVDAH SSKDWSSIAR 60 AVPGRSRKQC RDRWTHYLDP AVNQMPWSEQ EEIDLIRAHK IHGNKWCELA KFFPGRTGKA 120 IKNYWTGAMK KKIKSNLGSG SPEQLSPCPN DSLIPVGRDS TATSSQDSSN NIPISSADLP 180 VRLKSKHGLT EACRNACTLK EKGPDSIHDE GSIPHSVNVS QMVDGRTVGS SLHILTEEKL 240 VSPLSSVDEK VSCVAANSPK PLKEEESTNF LEIPPALSFQ SSNVHSDAIC SSADPESRQL 300 HLASIADLLD MSYCESLMVI APDSTNDEDF KLGM*
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