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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Sevir.1G007200.3.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family |
MYB |
Protein Properties |
Length: 331aa MW: 36465.7 Da PI: 5.1386 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sevir.1G007200.3.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 54.6 | 2.5e-17 | 28 | 74 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg+W++eE e+l++ v + +++W++Iar ++ gR++kqc++rw yl
Sevir.1G007200.3.p 28 RGAWSQEENEILIQMVDAHSSKDWSSIARAVP-GRSRKQCRDRWTHYL 74
89******************************.***********9886 PP
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2 | Myb_DNA-binding | 40.7 | 5.5e-13 | 81 | 121 | 2 | 44 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS
Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44
++W+++E+ l++a+k +G++ W a+ ++ gRt+k +k++w
Sevir.1G007200.3.p 81 MPWSEQEEIDLIRAHKIHGNK-WCELAKFFP-GRTGKAIKNYW 121
68*******************.*********.*********** PP
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Sequence ? help Back to Top |
Protein Sequence Length: 331 aa
Download sequence Send
to blast |
MFQHDEPLQA SEYFDDEEPE GTVSFKRRGA WSQEENEILI QMVDAHSSKD WSSIARAVPG 60 RSRKQCRDRW THYLDPAVNQ MPWSEQEEID LIRAHKIHGN KWCELAKFFP GRTGKAIKNY 120 WTGAMKKKIK SNLGSGSPEQ LSPCPNDSLI PVGRDSTATS SQDSSNNIPI SSADLPVRLK 180 SKHGLTEACR NACTLKEKGP DSIHDEGSIP HSVNVSQMVD GRTVGSSLHI LTEEKLVSPL 240 SSVDEKVSCV AANSPKPLKE EESTNFLEIP PALSFQSSNV HSDAICSSAD PESRQLHLAS 300 IADLLDMSYC ESLMVIAPDS TNDEDFKLGM *
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