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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Sevir.1G007200.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family |
MYB |
Protein Properties |
Length: 358aa MW: 39358.9 Da PI: 5.4375 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sevir.1G007200.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 54.4 | 2.8e-17 | 55 | 101 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg+W++eE e+l++ v + +++W++Iar ++ gR++kqc++rw yl
Sevir.1G007200.1.p 55 RGAWSQEENEILIQMVDAHSSKDWSSIARAVP-GRSRKQCRDRWTHYL 101
89******************************.***********9886 PP
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2 | Myb_DNA-binding | 40.6 | 6.1e-13 | 108 | 148 | 2 | 44 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS
Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44
++W+++E+ l++a+k +G++ W a+ ++ gRt+k +k++w
Sevir.1G007200.1.p 108 MPWSEQEEIDLIRAHKIHGNK-WCELAKFFP-GRTGKAIKNYW 148
68*******************.*********.*********** PP
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Sequence ? help Back to Top |
Protein Sequence Length: 358 aa
Download sequence Send
to blast |
MVRSAGGVHR RGTSTKPTSC SREIDWIAEE HDEPLQASEY FDDEEPEGTV SFKRRGAWSQ 60 EENEILIQMV DAHSSKDWSS IARAVPGRSR KQCRDRWTHY LDPAVNQMPW SEQEEIDLIR 120 AHKIHGNKWC ELAKFFPGRT GKAIKNYWTG AMKKKIKSNL GSGSPEQLSP CPNDSLIPVG 180 RDSTATSSQD SSNNIPISSA DLPVRLKSKH GLTEACRNAC TLKEKGPDSI HDEGSIPHSV 240 NVSQMVDGRT VGSSLHILTE EKLVSPLSSV DEKVSCVAAN SPKPLKEEES TNFLEIPPAL 300 SFQSSNVHSD AICSSADPES RQLHLASIAD LLDMSYCESL MVIAPDSTND EDFKLGM*
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