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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Seita.4G157600.1.p |
| Common Name | SETIT_008184mg |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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| Family |
MYB_related |
| Protein Properties |
Length: 235aa MW: 26505.7 Da PI: 8.6648 |
| Description |
MYB_related family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Seita.4G157600.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 28.6 | 3.2e-09 | 138 | 198 | 4 | 47 |
S-HHHHHHHHHHHHHTTTT...........-HHHHHHHHT......TTS-HHHHHHHHHHH CS
Myb_DNA-binding 4 WTteEdellvdavkqlGgg...........tWktIartmg......kgRtlkqcksrwqky 47
W +e+d++lv + + ++ Wk Ia + + k+Rt+ qck++w+k
Seita.4G157600.1.p 138 WNQEDDLRLVSCWLKNSNDpisgngkkschFWKDIADEYNkhapegKNRTAMQCKEHWNKT 198
***********************************************************96 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 235 aa
Download sequence Send
to blast |
MGHRAGHPPA RLEERERRRE AERCLRLFST MNFRPHHYPQ NYLSPHVHPN FHDHYPQNVN 60
PFLGPSYQSL SPTPASYHGG PFSRNIRQYL PGGVGGFVAN GPASPVGSMA FLLSSGGSKE 120
WSYASEDEAK KKGGRIIWNQ EDDLRLVSCW LKNSNDPISG NGKKSCHFWK DIADEYNKHA 180
PEGKNRTAMQ CKEHWNKTIP HINKFHGVYH DICSTIVGLL FDCQWHDCAG LSSN*
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