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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Seita.1G169900.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family |
MYB_related |
Protein Properties |
Length: 257aa MW: 27851.3 Da PI: 4.7679 |
Description |
MYB_related family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Seita.1G169900.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 24 | 9e-08 | 143 | 185 | 3 | 46 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
+WT+ E+ l++ + + g+ W++ +r+ Rt+ q+ s++qk
Seita.1G169900.1.p 143 KWTEYEHRLFLAGLPFYRGN-WNAMSREYLMSRTASQIASHYQK 185
8*****************99.*********99***********8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 257 aa
Download sequence Send
to blast |
MHHDGYVAAA AAPPLALAAS PTLEPEQEPK WTRRDDKFLE LLLFNRNTIS LHIASSIIGK 60 TPAQIHQRCT FMFAELSHVL ESLEVLTPLV WDMEIAAMAA AAEEEVVPEA VVPAAPPVAA 120 RKNSAERAIG AGGAKRNKKA AEKWTEYEHR LFLAGLPFYR GNWNAMSREY LMSRTASQIA 180 SHYQKASIHD ITEPGIAAAF AVSGGEAAAW KGELPRSEAS ARGQENEPWE PIESGEDGLS 240 PVEEFPSEDD PGTLLT*
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