PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.3596s0010.1.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family BES1
Protein Properties Length: 318aa    MW: 34168.1 Da    PI: 8.6916
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.3596s0010.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822211.62e-6551481148
                  DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssas 87 
                             g+sgr pt kErEnn rRERrRRaiaakiy+GLR qGn+klpk++DnneVlkALc eAGw+ve+DGttyrkg++p+   e+ag+ ++
  SapurV1A.3596s0010.1.p   5 GSSGRLPTCKERENNTRRERRRRAIAAKIYTGLRTQGNFKLPKHCDNNEVLKALCSEAGWIVEEDGTTYRKGCRPP-PIEIAGTPTN 90 
                             689*************************************************************************.********** PP

                  DUF822  88 aspesslqsslkssalaspvesysaspksssfpspssldsislasaasllpvlsvlslvss 148
                             +s +ss+q s++ss+++spv+sy+asp+sssfpsps++d +++   + llp+l++ ++++ 
  SapurV1A.3596s0010.1.p  91 ISACSSIQPSPQSSNFPSPVASYHASPTSSSFPSPSRFDGNPS---TYLLPFLRNIASIPT 148
                             *****************************************88...599999999887665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056872.0E-616130IPR008540BES1/BZR1 plant transcription factor, N-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009741Biological Processresponse to brassinosteroid
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    Send to blast
MTAGGSSGRL PTCKERENNT RRERRRRAIA AKIYTGLRTQ GNFKLPKHCD NNEVLKALCS  60
EAGWIVEEDG TTYRKGCRPP PIEIAGTPTN ISACSSIQPS PQSSNFPSPV ASYHASPTSS  120
SFPSPSRFDG NPSTYLLPFL RNIASIPTNL PPLRISNSAP VTPPLSSPTS RGSKRKADWE  180
SLSNATLNSL HHPLFAASAP SSPTRRHHLT PATIPECDES DASTVDSGRW VSFLAVAPQV  240
APPSPTFNLV KPVAQQNGNQ DEVDRHGGLS WGAAGERGRG AEFEFENCRV KPWEGERIHE  300
IGVDDLELTL GGGKARG*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A4e-282887391450Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B4e-282887391450Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C4e-282887391450Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D4e-282887391450Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.3596s0010.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEF1442160.0EF144216.1 Populus trichocarpa clone PX0011_E05 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002310201.10.0BES1/BZR1 homolog protein 2
SwissprotQ94A431e-118BEH2_ARATH; BES1/BZR1 homolog protein 2
TrEMBLA9P7X70.0A9P7X7_POPTR; Uncharacterized protein
STRINGPOPTR_0007s12370.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF127534105
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75080.22e-96BES1 family protein