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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
SapurV1A.3085s0020.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
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Family |
GRAS |
Protein Properties |
Length: 249aa MW: 28084.1 Da PI: 6.7256 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
SapurV1A.3085s0020.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 289.2 | 1.1e-88 | 1 | 247 | 127 | 373 |
GRAS 127 aLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlh 211
+LlqaLa+Rp+g+p++RiTg+++p s+ + + le+++ rL+ + +++++p+ef+ v d++ e+L+v+pgEalaVn+ lqlh
SapurV1A.3085s0020.1.p 1 SLLQALAARPGGAPHVRITGIDDPVSKyaRGDGLEAVAGRLSAISDKFNIPVEFHG-VPVFAPDVTKETLDVRPGEALAVNFPLQLH 86
79**********************999999**************************.6888999*********************** PP
GRAS 212 rlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvv 298
+++desv+++++rd +L+++ks +Pkvv++veqe+++n+++F++rf+e+l+yy a+f+s++++lpr+ +eri+vE+++l+r+ vnv+
SapurV1A.3085s0020.1.p 87 HTPDESVDVNNPRDGLLRMIKSFNPKVVTLVEQESNTNTTPFVTRFVETLNYYLAMFESIDVTLPRDRKERISVEQHCLARDMVNVI 173
*************************************************************************************** PP
GRAS 299 acegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
aceg+er+erhe ++kW++r+++aGF+++pls+++++ +++llr+++ + y++ e++++++lgWkdr+L+s+SaW
SapurV1A.3085s0020.1.p 174 ACEGKERVERHELFRKWKSRFMMAGFEQYPLSSYVNSVIRSLLRTYS-EHYTLVEKDEAMLLGWKDRSLISASAW 247
***********************************************.55************************* PP
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Sequence ? help Back to Top |
Protein Sequence Length: 249 aa
Download sequence Send
to blast |
SLLQALAARP GGAPHVRITG IDDPVSKYAR GDGLEAVAGR LSAISDKFNI PVEFHGVPVF 60 APDVTKETLD VRPGEALAVN FPLQLHHTPD ESVDVNNPRD GLLRMIKSFN PKVVTLVEQE 120 SNTNTTPFVT RFVETLNYYL AMFESIDVTL PRDRKERISV EQHCLARDMV NVIACEGKER 180 VERHELFRKW KSRFMMAGFE QYPLSSYVNS VIRSLLRTYS EHYTLVEKDE AMLLGWKDRS 240 LISASAWH*
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Functional Description ? help
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Source |
Description |
UniProt | May play a regulatory role in the early step of oligosaccharide elicitor response, downstream of the membrane-associated high-affinity chitin-binding protein. {ECO:0000269|PubMed:12591613}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By oligosaccharide elicitor (N-Acetylchitooligosaccharide) extracted from the rice blast fungus (M.grisea) cell wall. Strongest induction by chitin oligomer with greater degree of polymerization (heptamer). By inoculation of M.grisea in rice cell suspension culture. {ECO:0000269|PubMed:12591613}. |