PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.3073s0010.1.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family BES1
Protein Properties Length: 357aa    MW: 39106.7 Da    PI: 8.8712
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.3073s0010.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822215.71.1e-66441861147
                  DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssas 87 
                             g+s r ptwkErEnnkrRERrRRaiaakiy+GLR qGnyklpk++DnneVlkALc eAGw+ve+DGt yrkg++p+  +e+ag  ++
  SapurV1A.3073s0010.1.p  44 GSSARLPTWKERENNKRRERRRRAIAAKIYTGLRTQGNYKLPKHCDNNEVLKALCDEAGWIVEEDGTAYRKGCRPP-PSEIAGMPTN 129
                             5899************************************************************************.********** PP

                  DUF822  88 aspesslqsslkssalaspvesysaspksssfpspssldsislasaasllpvlsvlslvs 147
                             +s +ss+q s++ss+++spv+sy+asp+sssfpsp+++d ++++    llp+l++ ++++
  SapurV1A.3073s0010.1.p 130 ISACSSIQPSPQSSNFPSPVPSYHASPSSSSFPSPTRFDGNPSM---YLLPFLRNIASIP 186
                             *****************************************986...8999999888765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056871.3E-6246168IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 357 aa     Download sequence    Send to blast
MMRNHTQNIE STERKQHKNK DERERERESE GGREGLLGKM TTGGSSARLP TWKERENNKR  60
RERRRRAIAA KIYTGLRTQG NYKLPKHCDN NEVLKALCDE AGWIVEEDGT AYRKGCRPPP  120
SEIAGMPTNI SACSSIQPSP QSSNFPSPVP SYHASPSSSS FPSPTRFDGN PSMYLLPFLR  180
NIASIPTNLP PLRISNSAPV TPPPSSPTSR SSKRKADWES LSNGSLNSFR HPLFAASAPS  240
SPTRRPHLAP ATIPECDESD ASTVDSGRWV SFQAVAPQVA PPSPTFNLVK PVDQQCAFQD  300
GVDRHGGLSW GVAAERGRGA EFEFENCRVK PWEGERIHEI GVDDLDLTLG IGKALG*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A2e-2848125372449Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B2e-2848125372449Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C2e-2848125372449Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D2e-2848125372449Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.3073s0010.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEF1480140.0EF148014.1 Populus trichocarpa clone WS0126_M10 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006383241.10.0BES1/BZR1 homolog protein 2
SwissprotQ94A431e-117BEH2_ARATH; BES1/BZR1 homolog protein 2
TrEMBLA9PI050.0A9PI05_POPTR; BES1 family protein
STRINGPOPTR_0005s12790.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF127534105
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75080.22e-77BES1 family protein