PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.1013s0050.1.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family BES1
Protein Properties Length: 318aa    MW: 34429.5 Da    PI: 8.6803
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.1013s0050.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822216.18.4e-6751471147
                  DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssas 87 
                             g+s r ptwkErEnnkrRERrRRaiaakiy+GLR qGnyklpk++DnneVlkALc eAGw+ve+DGt yrkg++p+  +e+ag  ++
  SapurV1A.1013s0050.1.p   5 GSSARLPTWKERENNKRRERRRRAIAAKIYTGLRTQGNYKLPKHCDNNEVLKALCDEAGWIVEEDGTAYRKGCRPP-PSEIAGMPTN 90 
                             5899************************************************************************.********** PP

                  DUF822  88 aspesslqsslkssalaspvesysaspksssfpspssldsislasaasllpvlsvlslvs 147
                             +s +ss+q s++ss+++spv+sy+asp+sssfpsp+++d ++++    llp+l++ ++++
  SapurV1A.1013s0050.1.p  91 ISACSSIQPSPQSSNFPSPVPSYHASPSSSSFPSPTRFDGNPSM---YLLPFLRNIASIP 147
                             *****************************************986...8999999888765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056879.7E-637129IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    Send to blast
MTTGGSSARL PTWKERENNK RRERRRRAIA AKIYTGLRTQ GNYKLPKHCD NNEVLKALCD  60
EAGWIVEEDG TAYRKGCRPP PSEIAGMPTN ISACSSIQPS PQSSNFPSPV PSYHASPSSS  120
SFPSPTRFDG NPSMYLLPFL RNIASIPTNL PPLRISNSAP VTPPPSSPTS RSSKRKADWE  180
SLSNGSLNSF RHPLFAASAP SSPTRRPHLA PATIPECDES DASTVDSGRW VSFQAVAPQV  240
APPSPTFNLV KPVDQQCAFQ DGVDRHGGLS WGVAAERGRG AEFEFENCRV KPWEGERIHE  300
IGVDDLDLTL GIGKALG*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A1e-28986372449Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B1e-28986372449Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C1e-28986372449Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D1e-28986372449Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.1013s0050.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEF1480140.0EF148014.1 Populus trichocarpa clone WS0126_M10 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006383241.10.0BES1/BZR1 homolog protein 2
SwissprotQ94A431e-117BEH2_ARATH; BES1/BZR1 homolog protein 2
TrEMBLA9PI050.0A9PI05_POPTR; BES1 family protein
STRINGPOPTR_0005s12790.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF127534105
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75080.29e-78BES1 family protein