PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SapurV1A.0317s0220.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
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Family | ERF | ||||||||
Protein Properties | Length: 419aa MW: 45569 Da PI: 7.1865 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.2 | 3.6e-17 | 53 | 102 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +gr++AeIrdp + r +lg+f+taeeAa a++ a++ ++g SapurV1A.0317s0220.1.p 53 RYRGVRRRP-WGRYAAEIRDPQ----SkERRWLGTFDTAEEAACAYDYAARVMRG 102 59*******.**********93....35999*******************99987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF54171 | 6.54E-21 | 53 | 110 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 8.8E-29 | 53 | 109 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 22.01 | 53 | 110 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 5.26E-28 | 53 | 109 | No hit | No description |
SMART | SM00380 | 5.1E-31 | 53 | 116 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 2.0E-10 | 53 | 102 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 2.5E-9 | 54 | 65 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 2.5E-9 | 76 | 92 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 419 aa Download sequence Send to blast |
MEEALRRLNG MPNHVPESNP PETIIVDLQK KSAPATTSKR SLKESGGNSG NMRYRGVRRR 60 PWGRYAAEIR DPQSKERRWL GTFDTAEEAA CAYDYAARVM RGIKARTNFV YPETYSATTD 120 SQNLLPPFTF SKSSHHQPSR QCNTAPTANW SSLGHSFVGD FSAGWSAPQR SSSGSAANTS 180 SLNMLFLRDF VNSSSGSSSQ NHAQPLYHDH FPCINGSSYS APSTYSGGSL SNPSSNSSSA 240 GLYNFSGNLA NSTVTSLPHM EFNQNYTPVA LNRPASKAED LGFFPQEPSG SGLLQEIIQG 300 FLPKHSTETT DFSKSSGESM VAPSAEIIFG GQSLDGSRST KKHFVENDHR GAAYLDHEGI 360 KPSAQAGGYY RTGVSCHEQA PYNNEMSLNL PVGQDSFLED IFQYPDLMSA FAARFNNV* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5wx9_A | 6e-18 | 53 | 116 | 14 | 76 | Ethylene-responsive transcription factor ERF096 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | SapurV1A.0317s0220.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002314597.2 | 0.0 | ethylene-responsive transcription factor ESR2 | ||||
TrEMBL | A0A2K1YNX2 | 0.0 | A0A2K1YNX2_POPTR; Uncharacterized protein | ||||
STRING | POPTR_0010s05670.1 | 0.0 | (Populus trichocarpa) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF4100 | 32 | 56 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G24590.1 | 1e-14 | DORNROSCHEN-like |
Link Out ? help Back to Top | |
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Phytozome | SapurV1A.0317s0220.1.p |