PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0180s0230.1.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family WRKY
Protein Properties Length: 264aa    MW: 29706.7 Da    PI: 4.8256
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0180s0230.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY955.3e-3052110259
                             --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                    WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                             +D ++WrKYGqK++kgs++pr+YYrC+++ gC++kk+ver+++d +v+++tY+++Hnh+
  SapurV1A.0180s0230.1.p  52 SDFWSWRKYGQKPIKGSPYPRGYYRCSTSkGCSAKKQVERCRTDSSVLIVTYTSNHNHP 110
                             699***********************9988****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.9E-3145112IPR003657WRKY domain
SuperFamilySSF1182905.23E-2649112IPR003657WRKY domain
SMARTSM007742.3E-3551111IPR003657WRKY domain
PROSITE profilePS5081131.22752112IPR003657WRKY domain
PfamPF031064.7E-2553110IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    Send to blast
MDSSPSRKLD SNVSELAPET QTSKRRKVVE KTVVRVRVGE NAGKLKNEGP PSDFWSWRKY  60
GQKPIKGSPY PRGYYRCSTS KGCSAKKQVE RCRTDSSVLI VTYTSNHNHP GPDLHDSDEN  120
QQPNDLGTPL TDPVDHPITP KQEGTEEETE ERHGHPIMLS ADEDVSEGHN FHYLQSPIRI  180
PQDIMISQDY DPFNESSEKS HGTLGIFLDE EPICCSRLMT FPEPKSEESN DFFDELEELP  240
TSSSFTSFLR GSFFDERIPA VPS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B6e-21531121879Disease resistance protein RRS1
5w3x_D6e-21531121879Disease resistance protein RRS1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0180s0230.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011041119.11e-146PREDICTED: probable WRKY transcription factor 69 isoform X1
TrEMBLB9I9I21e-166B9I9I2_POPTR; Uncharacterized protein
STRINGPOPTR_0014s11490.11e-167(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF97083241
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34830.15e-33WRKY DNA-binding protein 35