PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SapurV1A.0068s0140.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 743aa MW: 81920.1 Da PI: 5.7341 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 65.1 | 9.9e-21 | 53 | 108 | 1 | 56 |
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 r+k ++t++q++eLe++F+++++p++++r eL+++lgL+ +q+k+WFqNrR+++k SapurV1A.0068s0140.1.p 53 RKKYNRHTANQIQELESFFKECPHPDEKQRSELSRRLGLESKQIKFWFQNRRTQMK 108 79999************************************************999 PP | |||||||
2 | START | 179.4 | 2.2e-56 | 258 | 474 | 2 | 205 |
HHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S.. CS START 2 laeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla.. 77 la++a++el+k+a+ e+p W ks e +n +e++++f++ + + ea r+sgvv ++ lve+l+d++ W e+++ SapurV1A.0068s0140.1.p 258 LALAAMDELIKMAQIESPIWIKSLdggkEVLNHEEYTRTFPPCIGmkpsnFVFEATRESGVVLIDSLALVETLMDVN-GWVEMFPsl 343 6899**********************9999************999999999**************************.********* PP ..EEEEEEEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEE CS START 78 ..kaetlevissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgilie 155 +a+t++vissg galq + ae+q++sp vp R + f+R ++ql++g+w+++dvSvd +q + +++lpSg++i+ SapurV1A.0068s0140.1.p 344 iaRAATIDVISSGmggtksGALQIIHAEFQVISPFVPvRQVKFLRLCKQLTEGVWAVADVSVDGNQTHVT------CRRLPSGCIIQ 424 ****************************************************************999765......99********* PP EECTCEEEEEEEE-EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXX CS START 156 pksnghskvtwvehvdlkgrlphwllrslvksglaegaktwvatlqrqce 205 ++ ng +kvtwveh +++++ +h+l+r++++sg+ +ga++w a+lqr+ e SapurV1A.0068s0140.1.p 425 DMNNGCCKVTWVEHSEYDESAVHQLYRHILNSGMGFGAQRWIAALQRHYE 474 ***********************************************977 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF46689 | 1.04E-19 | 39 | 110 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 4.1E-21 | 39 | 91 | IPR009057 | Homeodomain-like |
PROSITE profile | PS50071 | 18.253 | 50 | 110 | IPR001356 | Homeobox domain |
SMART | SM00389 | 1.5E-18 | 52 | 114 | IPR001356 | Homeobox domain |
Pfam | PF00046 | 2.8E-18 | 53 | 108 | IPR001356 | Homeobox domain |
CDD | cd00086 | 9.46E-19 | 53 | 110 | No hit | No description |
PROSITE pattern | PS00027 | 0 | 85 | 108 | IPR017970 | Homeobox, conserved site |
Gene3D | G3DSA:1.10.10.60 | 0.001 | 92 | 135 | IPR009057 | Homeodomain-like |
PROSITE profile | PS50848 | 38.472 | 248 | 478 | IPR002913 | START domain |
SuperFamily | SSF55961 | 9.77E-33 | 250 | 474 | No hit | No description |
CDD | cd08875 | 4.12E-113 | 252 | 474 | No hit | No description |
SMART | SM00234 | 4.0E-40 | 257 | 475 | IPR002913 | START domain |
Pfam | PF01852 | 2.8E-48 | 258 | 474 | IPR002913 | START domain |
Gene3D | G3DSA:3.30.530.20 | 1.1E-4 | 311 | 472 | IPR023393 | START-like domain |
SuperFamily | SSF55961 | 8.55E-16 | 503 | 738 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0008289 | Molecular Function | lipid binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 743 aa Download sequence Send to blast |
MDSHGDMGLL VEHFDPSLVG RTREDGYESR SGSDNIEGAS GEDQDAGDYQ RPRKKYNRHT 60 ANQIQELESF FKECPHPDEK QRSELSRRLG LESKQIKFWF QNRRTQMKTQ LERHENAILR 120 QENDKLRAEN EMLKHNMSDP ICNSCGGPVV PVPVPYEQQQ LRIENARLKD ELSRVCALAN 180 KFLGRPLTSS ANPVPPFGSN TKLDLAVGRN GYGNLGHTDN TLPMGFDNDG GVMMPLMKPI 240 GDAVGNEVSF DRSMFVDLAL AAMDELIKMA QIESPIWIKS LDGGKEVLNH EEYTRTFPPC 300 IGMKPSNFVF EATRESGVVL IDSLALVETL MDVNGWVEMF PSLIARAATI DVISSGMGGT 360 KSGALQIIHA EFQVISPFVP VRQVKFLRLC KQLTEGVWAV ADVSVDGNQT HVTCRRLPSG 420 CIIQDMNNGC CKVTWVEHSE YDESAVHQLY RHILNSGMGF GAQRWIAALQ RHYECMAILL 480 SPTILGEDQT AINLGGKKSM LKLARRMVDS FCSGVCASTL HNWGNLVVES VSEDVRILTR 540 KIINEPGEPD GIVLSVSTSV WLPVSQQRLF DFLRDEQSRS QWDILSNGGM LQEMVQIPKG 600 QGHWNSVSVL RSTAVDAKAG DNMLILQETW NDVSGSLVVY APVDVQSVSV VMNGGDSTYV 660 ALLPSGFVIL PDNSFSNGEP NSCHGNPAKR DCDGKDGGGS FLTVGFQILA SNLPSAKLTV 720 ESVKTVHNLI SCTMQRIKTA FN* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor involved in the regulation of the tissue-specific accumulation of anthocyanins and in cellular organization of the primary root. {ECO:0000269|PubMed:10402424}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | SapurV1A.0068s0140.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002322460.1 | 0.0 | homeobox-leucine zipper protein ANTHOCYANINLESS 2 isoform X2 | ||||
Refseq | XP_024442056.1 | 0.0 | homeobox-leucine zipper protein ANTHOCYANINLESS 2 isoform X2 | ||||
Swissprot | Q0WV12 | 0.0 | ANL2_ARATH; Homeobox-leucine zipper protein ANTHOCYANINLESS 2 | ||||
TrEMBL | A0A3N7G4W5 | 0.0 | A0A3N7G4W5_POPTR; Uncharacterized protein | ||||
STRING | POPTR_0015s13340.1 | 0.0 | (Populus trichocarpa) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1192 | 34 | 106 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G00730.1 | 0.0 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | SapurV1A.0068s0140.1.p |
Publications ? help Back to Top | |||
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